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1309 lines
31 KiB
1309 lines
31 KiB
// Copyright 2017 The Prometheus Authors |
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// Licensed under the Apache License, Version 2.0 (the "License"); |
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// you may not use this file except in compliance with the License. |
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// You may obtain a copy of the License at |
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// |
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// http://www.apache.org/licenses/LICENSE-2.0 |
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// |
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// Unless required by applicable law or agreed to in writing, software |
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// distributed under the License is distributed on an "AS IS" BASIS, |
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// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. |
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// See the License for the specific language governing permissions and |
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// limitations under the License. |
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|
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package tsdb |
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|
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import ( |
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"bufio" |
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"encoding/binary" |
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"fmt" |
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"hash" |
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"hash/crc32" |
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"io" |
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"math" |
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"os" |
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"path/filepath" |
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"sort" |
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"sync" |
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"time" |
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|
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"github.com/go-kit/log" |
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"github.com/go-kit/log/level" |
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"github.com/pkg/errors" |
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"github.com/prometheus/client_golang/prometheus" |
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|
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"github.com/prometheus/prometheus/model/labels" |
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"github.com/prometheus/prometheus/storage" |
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"github.com/prometheus/prometheus/tsdb/chunks" |
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"github.com/prometheus/prometheus/tsdb/encoding" |
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"github.com/prometheus/prometheus/tsdb/fileutil" |
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"github.com/prometheus/prometheus/tsdb/record" |
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"github.com/prometheus/prometheus/tsdb/tombstones" |
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"github.com/prometheus/prometheus/tsdb/wal" |
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) |
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|
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// WALEntryType indicates what data a WAL entry contains. |
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type WALEntryType uint8 |
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|
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const ( |
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// WALMagic is a 4 byte number every WAL segment file starts with. |
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WALMagic = uint32(0x43AF00EF) |
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|
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// WALFormatDefault is the version flag for the default outer segment file format. |
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WALFormatDefault = byte(1) |
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) |
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|
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// Entry types in a segment file. |
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const ( |
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WALEntrySymbols WALEntryType = 1 |
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WALEntrySeries WALEntryType = 2 |
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WALEntrySamples WALEntryType = 3 |
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WALEntryDeletes WALEntryType = 4 |
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) |
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type walMetrics struct { |
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fsyncDuration prometheus.Summary |
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corruptions prometheus.Counter |
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} |
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|
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func newWalMetrics(r prometheus.Registerer) *walMetrics { |
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m := &walMetrics{} |
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m.fsyncDuration = prometheus.NewSummary(prometheus.SummaryOpts{ |
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Name: "prometheus_tsdb_wal_fsync_duration_seconds", |
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Help: "Duration of WAL fsync.", |
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Objectives: map[float64]float64{0.5: 0.05, 0.9: 0.01, 0.99: 0.001}, |
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}) |
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m.corruptions = prometheus.NewCounter(prometheus.CounterOpts{ |
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Name: "prometheus_tsdb_wal_corruptions_total", |
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Help: "Total number of WAL corruptions.", |
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}) |
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|
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if r != nil { |
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r.MustRegister( |
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m.fsyncDuration, |
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m.corruptions, |
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) |
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} |
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return m |
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} |
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|
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// WAL is a write ahead log that can log new series labels and samples. |
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// It must be completely read before new entries are logged. |
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// |
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// DEPRECATED: use wal pkg combined with the record codex instead. |
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type WAL interface { |
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Reader() WALReader |
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LogSeries([]record.RefSeries) error |
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LogSamples([]record.RefSample) error |
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LogDeletes([]tombstones.Stone) error |
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Truncate(mint int64, keep func(uint64) bool) error |
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Close() error |
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} |
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|
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// WALReader reads entries from a WAL. |
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type WALReader interface { |
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Read( |
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seriesf func([]record.RefSeries), |
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samplesf func([]record.RefSample), |
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deletesf func([]tombstones.Stone), |
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) error |
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} |
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|
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// segmentFile wraps a file object of a segment and tracks the highest timestamp |
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// it contains. During WAL truncating, all segments with no higher timestamp than |
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// the truncation threshold can be compacted. |
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type segmentFile struct { |
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*os.File |
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maxTime int64 // highest tombstone or sample timestamp in segment |
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minSeries chunks.HeadSeriesRef // lowerst series ID in segment |
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} |
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|
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func newSegmentFile(f *os.File) *segmentFile { |
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return &segmentFile{ |
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File: f, |
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maxTime: math.MinInt64, |
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minSeries: math.MaxUint64, |
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} |
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} |
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|
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const ( |
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walSegmentSizeBytes = 256 * 1024 * 1024 // 256 MB |
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) |
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|
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// The table gets initialized with sync.Once but may still cause a race |
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// with any other use of the crc32 package anywhere. Thus we initialize it |
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// before. |
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var castagnoliTable *crc32.Table |
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|
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func init() { |
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castagnoliTable = crc32.MakeTable(crc32.Castagnoli) |
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} |
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|
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// newCRC32 initializes a CRC32 hash with a preconfigured polynomial, so the |
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// polynomial may be easily changed in one location at a later time, if necessary. |
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func newCRC32() hash.Hash32 { |
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return crc32.New(castagnoliTable) |
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} |
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// SegmentWAL is a write ahead log for series data. |
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// |
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// DEPRECATED: use wal pkg combined with the record coders instead. |
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type SegmentWAL struct { |
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mtx sync.Mutex |
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metrics *walMetrics |
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dirFile *os.File |
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files []*segmentFile |
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logger log.Logger |
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flushInterval time.Duration |
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segmentSize int64 |
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crc32 hash.Hash32 |
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cur *bufio.Writer |
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curN int64 |
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stopc chan struct{} |
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donec chan struct{} |
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actorc chan func() error // sequentialized background operations |
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buffers sync.Pool |
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} |
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|
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// OpenSegmentWAL opens or creates a write ahead log in the given directory. |
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// The WAL must be read completely before new data is written. |
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func OpenSegmentWAL(dir string, logger log.Logger, flushInterval time.Duration, r prometheus.Registerer) (*SegmentWAL, error) { |
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if err := os.MkdirAll(dir, 0o777); err != nil { |
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return nil, err |
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} |
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df, err := fileutil.OpenDir(dir) |
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if err != nil { |
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return nil, err |
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} |
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if logger == nil { |
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logger = log.NewNopLogger() |
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} |
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|
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w := &SegmentWAL{ |
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dirFile: df, |
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logger: logger, |
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flushInterval: flushInterval, |
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donec: make(chan struct{}), |
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stopc: make(chan struct{}), |
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actorc: make(chan func() error, 2), |
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segmentSize: walSegmentSizeBytes, |
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crc32: newCRC32(), |
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} |
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w.metrics = newWalMetrics(r) |
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|
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fns, err := sequenceFiles(w.dirFile.Name()) |
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if err != nil { |
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return nil, err |
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} |
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for i, fn := range fns { |
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f, err := w.openSegmentFile(fn) |
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if err == nil { |
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w.files = append(w.files, newSegmentFile(f)) |
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continue |
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} |
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level.Warn(logger).Log("msg", "Invalid segment file detected, truncating WAL", "err", err, "file", fn) |
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|
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for _, fn := range fns[i:] { |
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if err := os.Remove(fn); err != nil { |
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return w, errors.Wrap(err, "removing segment failed") |
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} |
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} |
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break |
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} |
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go w.run(flushInterval) |
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return w, nil |
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} |
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// repairingWALReader wraps a WAL reader and truncates its underlying SegmentWAL after the last |
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// valid entry if it encounters corruption. |
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type repairingWALReader struct { |
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wal *SegmentWAL |
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r WALReader |
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} |
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func (r *repairingWALReader) Read( |
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seriesf func([]record.RefSeries), |
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samplesf func([]record.RefSample), |
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deletesf func([]tombstones.Stone), |
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) error { |
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err := r.r.Read(seriesf, samplesf, deletesf) |
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if err == nil { |
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return nil |
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} |
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cerr, ok := errors.Cause(err).(walCorruptionErr) |
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if !ok { |
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return err |
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} |
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r.wal.metrics.corruptions.Inc() |
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return r.wal.truncate(cerr.err, cerr.file, cerr.lastOffset) |
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} |
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|
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// truncate the WAL after the last valid entry. |
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func (w *SegmentWAL) truncate(err error, file int, lastOffset int64) error { |
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level.Error(w.logger).Log("msg", "WAL corruption detected; truncating", |
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"err", err, "file", w.files[file].Name(), "pos", lastOffset) |
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|
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// Close and delete all files after the current one. |
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for _, f := range w.files[file+1:] { |
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if err := f.Close(); err != nil { |
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return err |
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} |
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if err := os.Remove(f.Name()); err != nil { |
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return err |
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} |
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} |
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w.mtx.Lock() |
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defer w.mtx.Unlock() |
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w.files = w.files[:file+1] |
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|
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// Seek the current file to the last valid offset where we continue writing from. |
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_, err = w.files[file].Seek(lastOffset, io.SeekStart) |
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return err |
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} |
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|
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// Reader returns a new reader over the write ahead log data. |
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// It must be completely consumed before writing to the WAL. |
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func (w *SegmentWAL) Reader() WALReader { |
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return &repairingWALReader{ |
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wal: w, |
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r: newWALReader(w.files, w.logger), |
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} |
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} |
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func (w *SegmentWAL) getBuffer() *encoding.Encbuf { |
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b := w.buffers.Get() |
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if b == nil { |
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return &encoding.Encbuf{B: make([]byte, 0, 64*1024)} |
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} |
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return b.(*encoding.Encbuf) |
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} |
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func (w *SegmentWAL) putBuffer(b *encoding.Encbuf) { |
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b.Reset() |
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w.buffers.Put(b) |
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} |
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// Truncate deletes the values prior to mint and the series which the keep function |
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// does not indicate to preserve. |
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func (w *SegmentWAL) Truncate(mint int64, keep func(chunks.HeadSeriesRef) bool) error { |
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// The last segment is always active. |
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if len(w.files) < 2 { |
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return nil |
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} |
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var candidates []*segmentFile |
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|
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// All files have to be traversed as there could be two segments for a block |
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// with first block having times (10000, 20000) and SECOND one having (0, 10000). |
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for _, sf := range w.files[:len(w.files)-1] { |
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if sf.maxTime >= mint { |
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break |
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} |
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// Past WAL files are closed. We have to reopen them for another read. |
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f, err := w.openSegmentFile(sf.Name()) |
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if err != nil { |
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return errors.Wrap(err, "open old WAL segment for read") |
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} |
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candidates = append(candidates, &segmentFile{ |
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File: f, |
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minSeries: sf.minSeries, |
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maxTime: sf.maxTime, |
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}) |
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} |
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if len(candidates) == 0 { |
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return nil |
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} |
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|
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r := newWALReader(candidates, w.logger) |
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|
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// Create a new tmp file. |
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f, err := w.createSegmentFile(filepath.Join(w.dirFile.Name(), "compact.tmp")) |
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if err != nil { |
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return errors.Wrap(err, "create compaction segment") |
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} |
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defer func() { |
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if err := os.RemoveAll(f.Name()); err != nil { |
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level.Error(w.logger).Log("msg", "remove tmp file", "err", err.Error()) |
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} |
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}() |
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var ( |
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csf = newSegmentFile(f) |
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crc32 = newCRC32() |
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decSeries = []record.RefSeries{} |
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activeSeries = []record.RefSeries{} |
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) |
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|
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for r.next() { |
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rt, flag, byt := r.at() |
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|
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if rt != WALEntrySeries { |
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continue |
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} |
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decSeries = decSeries[:0] |
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activeSeries = activeSeries[:0] |
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|
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err := r.decodeSeries(flag, byt, &decSeries) |
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if err != nil { |
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return errors.Wrap(err, "decode samples while truncating") |
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} |
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for _, s := range decSeries { |
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if keep(s.Ref) { |
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activeSeries = append(activeSeries, s) |
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} |
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} |
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|
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buf := w.getBuffer() |
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flag = w.encodeSeries(buf, activeSeries) |
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_, err = w.writeTo(csf, crc32, WALEntrySeries, flag, buf.Get()) |
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w.putBuffer(buf) |
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|
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if err != nil { |
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return errors.Wrap(err, "write to compaction segment") |
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} |
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} |
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if r.Err() != nil { |
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return errors.Wrap(r.Err(), "read candidate WAL files") |
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} |
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|
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off, err := csf.Seek(0, io.SeekCurrent) |
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if err != nil { |
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return err |
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} |
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if err := csf.Truncate(off); err != nil { |
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return err |
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} |
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if err := csf.Sync(); err != nil { |
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return nil |
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} |
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if err := csf.Close(); err != nil { |
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return nil |
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} |
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|
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_ = candidates[0].Close() // need close before remove on platform windows |
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if err := fileutil.Replace(csf.Name(), candidates[0].Name()); err != nil { |
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return errors.Wrap(err, "rename compaction segment") |
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} |
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for _, f := range candidates[1:] { |
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f.Close() // need close before remove on platform windows |
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if err := os.RemoveAll(f.Name()); err != nil { |
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return errors.Wrap(err, "delete WAL segment file") |
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} |
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} |
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if err := w.dirFile.Sync(); err != nil { |
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return err |
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} |
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|
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// The file object of csf still holds the name before rename. Recreate it so |
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// subsequent truncations do not look at a non-existent file name. |
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csf.File, err = w.openSegmentFile(candidates[0].Name()) |
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if err != nil { |
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return err |
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} |
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// We don't need it to be open. |
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if err := csf.Close(); err != nil { |
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return err |
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} |
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|
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w.mtx.Lock() |
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w.files = append([]*segmentFile{csf}, w.files[len(candidates):]...) |
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w.mtx.Unlock() |
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|
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return nil |
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} |
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|
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// LogSeries writes a batch of new series labels to the log. |
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// The series have to be ordered. |
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func (w *SegmentWAL) LogSeries(series []record.RefSeries) error { |
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buf := w.getBuffer() |
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|
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flag := w.encodeSeries(buf, series) |
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|
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w.mtx.Lock() |
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defer w.mtx.Unlock() |
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|
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err := w.write(WALEntrySeries, flag, buf.Get()) |
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|
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w.putBuffer(buf) |
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|
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if err != nil { |
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return errors.Wrap(err, "log series") |
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} |
|
|
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tf := w.head() |
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|
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for _, s := range series { |
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if tf.minSeries > s.Ref { |
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tf.minSeries = s.Ref |
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} |
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} |
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return nil |
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} |
|
|
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// LogSamples writes a batch of new samples to the log. |
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func (w *SegmentWAL) LogSamples(samples []record.RefSample) error { |
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buf := w.getBuffer() |
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|
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flag := w.encodeSamples(buf, samples) |
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|
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w.mtx.Lock() |
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defer w.mtx.Unlock() |
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|
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err := w.write(WALEntrySamples, flag, buf.Get()) |
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|
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w.putBuffer(buf) |
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|
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if err != nil { |
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return errors.Wrap(err, "log series") |
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} |
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tf := w.head() |
|
|
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for _, s := range samples { |
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if tf.maxTime < s.T { |
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tf.maxTime = s.T |
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} |
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} |
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return nil |
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} |
|
|
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// LogDeletes write a batch of new deletes to the log. |
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func (w *SegmentWAL) LogDeletes(stones []tombstones.Stone) error { |
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buf := w.getBuffer() |
|
|
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flag := w.encodeDeletes(buf, stones) |
|
|
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w.mtx.Lock() |
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defer w.mtx.Unlock() |
|
|
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err := w.write(WALEntryDeletes, flag, buf.Get()) |
|
|
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w.putBuffer(buf) |
|
|
|
if err != nil { |
|
return errors.Wrap(err, "log series") |
|
} |
|
tf := w.head() |
|
|
|
for _, s := range stones { |
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for _, iv := range s.Intervals { |
|
if tf.maxTime < iv.Maxt { |
|
tf.maxTime = iv.Maxt |
|
} |
|
} |
|
} |
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return nil |
|
} |
|
|
|
// openSegmentFile opens the given segment file and consumes and validates header. |
|
func (w *SegmentWAL) openSegmentFile(name string) (*os.File, error) { |
|
// We must open all files in read/write mode as we may have to truncate along |
|
// the way and any file may become the head. |
|
f, err := os.OpenFile(name, os.O_RDWR, 0o666) |
|
if err != nil { |
|
return nil, err |
|
} |
|
metab := make([]byte, 8) |
|
|
|
// If there is an error, we need close f for platform windows before gc. |
|
// Otherwise, file op may fail. |
|
hasError := true |
|
defer func() { |
|
if hasError { |
|
f.Close() |
|
} |
|
}() |
|
|
|
if n, err := f.Read(metab); err != nil { |
|
return nil, errors.Wrapf(err, "validate meta %q", f.Name()) |
|
} else if n != 8 { |
|
return nil, errors.Errorf("invalid header size %d in %q", n, f.Name()) |
|
} |
|
|
|
if m := binary.BigEndian.Uint32(metab[:4]); m != WALMagic { |
|
return nil, errors.Errorf("invalid magic header %x in %q", m, f.Name()) |
|
} |
|
if metab[4] != WALFormatDefault { |
|
return nil, errors.Errorf("unknown WAL segment format %d in %q", metab[4], f.Name()) |
|
} |
|
hasError = false |
|
return f, nil |
|
} |
|
|
|
// createSegmentFile creates a new segment file with the given name. It preallocates |
|
// the standard segment size if possible and writes the header. |
|
func (w *SegmentWAL) createSegmentFile(name string) (*os.File, error) { |
|
f, err := os.Create(name) |
|
if err != nil { |
|
return nil, err |
|
} |
|
if err = fileutil.Preallocate(f, w.segmentSize, true); err != nil { |
|
return nil, err |
|
} |
|
// Write header metadata for new file. |
|
metab := make([]byte, 8) |
|
binary.BigEndian.PutUint32(metab[:4], WALMagic) |
|
metab[4] = WALFormatDefault |
|
|
|
if _, err := f.Write(metab); err != nil { |
|
return nil, err |
|
} |
|
return f, err |
|
} |
|
|
|
// cut finishes the currently active segments and opens the next one. |
|
// The encoder is reset to point to the new segment. |
|
func (w *SegmentWAL) cut() error { |
|
// Sync current head to disk and close. |
|
if hf := w.head(); hf != nil { |
|
if err := w.flush(); err != nil { |
|
return err |
|
} |
|
// Finish last segment asynchronously to not block the WAL moving along |
|
// in the new segment. |
|
go func() { |
|
w.actorc <- func() error { |
|
off, err := hf.Seek(0, io.SeekCurrent) |
|
if err != nil { |
|
return errors.Wrapf(err, "finish old segment %s", hf.Name()) |
|
} |
|
if err := hf.Truncate(off); err != nil { |
|
return errors.Wrapf(err, "finish old segment %s", hf.Name()) |
|
} |
|
if err := hf.Sync(); err != nil { |
|
return errors.Wrapf(err, "finish old segment %s", hf.Name()) |
|
} |
|
if err := hf.Close(); err != nil { |
|
return errors.Wrapf(err, "finish old segment %s", hf.Name()) |
|
} |
|
return nil |
|
} |
|
}() |
|
} |
|
|
|
p, _, err := nextSequenceFile(w.dirFile.Name()) |
|
if err != nil { |
|
return err |
|
} |
|
f, err := w.createSegmentFile(p) |
|
if err != nil { |
|
return err |
|
} |
|
|
|
go func() { |
|
w.actorc <- func() error { |
|
return errors.Wrap(w.dirFile.Sync(), "sync WAL directory") |
|
} |
|
}() |
|
|
|
w.files = append(w.files, newSegmentFile(f)) |
|
|
|
// TODO(gouthamve): make the buffer size a constant. |
|
w.cur = bufio.NewWriterSize(f, 8*1024*1024) |
|
w.curN = 8 |
|
|
|
return nil |
|
} |
|
|
|
func (w *SegmentWAL) head() *segmentFile { |
|
if len(w.files) == 0 { |
|
return nil |
|
} |
|
return w.files[len(w.files)-1] |
|
} |
|
|
|
// Sync flushes the changes to disk. |
|
func (w *SegmentWAL) Sync() error { |
|
var head *segmentFile |
|
var err error |
|
|
|
// Flush the writer and retrieve the reference to the head segment under mutex lock. |
|
func() { |
|
w.mtx.Lock() |
|
defer w.mtx.Unlock() |
|
if err = w.flush(); err != nil { |
|
return |
|
} |
|
head = w.head() |
|
}() |
|
if err != nil { |
|
return errors.Wrap(err, "flush buffer") |
|
} |
|
if head != nil { |
|
// But only fsync the head segment after releasing the mutex as it will block on disk I/O. |
|
start := time.Now() |
|
err := fileutil.Fdatasync(head.File) |
|
w.metrics.fsyncDuration.Observe(time.Since(start).Seconds()) |
|
return err |
|
} |
|
return nil |
|
} |
|
|
|
func (w *SegmentWAL) sync() error { |
|
if err := w.flush(); err != nil { |
|
return err |
|
} |
|
if w.head() == nil { |
|
return nil |
|
} |
|
|
|
start := time.Now() |
|
err := fileutil.Fdatasync(w.head().File) |
|
w.metrics.fsyncDuration.Observe(time.Since(start).Seconds()) |
|
return err |
|
} |
|
|
|
func (w *SegmentWAL) flush() error { |
|
if w.cur == nil { |
|
return nil |
|
} |
|
return w.cur.Flush() |
|
} |
|
|
|
func (w *SegmentWAL) run(interval time.Duration) { |
|
var tick <-chan time.Time |
|
|
|
if interval > 0 { |
|
ticker := time.NewTicker(interval) |
|
defer ticker.Stop() |
|
tick = ticker.C |
|
} |
|
defer close(w.donec) |
|
|
|
for { |
|
// Processing all enqueued operations has precedence over shutdown and |
|
// background syncs. |
|
select { |
|
case f := <-w.actorc: |
|
if err := f(); err != nil { |
|
level.Error(w.logger).Log("msg", "operation failed", "err", err) |
|
} |
|
continue |
|
default: |
|
} |
|
select { |
|
case <-w.stopc: |
|
return |
|
case f := <-w.actorc: |
|
if err := f(); err != nil { |
|
level.Error(w.logger).Log("msg", "operation failed", "err", err) |
|
} |
|
case <-tick: |
|
if err := w.Sync(); err != nil { |
|
level.Error(w.logger).Log("msg", "sync failed", "err", err) |
|
} |
|
} |
|
} |
|
} |
|
|
|
// Close syncs all data and closes the underlying resources. |
|
func (w *SegmentWAL) Close() error { |
|
// Make sure you can call Close() multiple times. |
|
select { |
|
case <-w.stopc: |
|
return nil // Already closed. |
|
default: |
|
} |
|
|
|
close(w.stopc) |
|
<-w.donec |
|
|
|
w.mtx.Lock() |
|
defer w.mtx.Unlock() |
|
|
|
if err := w.sync(); err != nil { |
|
return err |
|
} |
|
// On opening, a WAL must be fully consumed once. Afterwards |
|
// only the current segment will still be open. |
|
if hf := w.head(); hf != nil { |
|
if err := hf.Close(); err != nil { |
|
return errors.Wrapf(err, "closing WAL head %s", hf.Name()) |
|
} |
|
} |
|
|
|
return errors.Wrapf(w.dirFile.Close(), "closing WAL dir %s", w.dirFile.Name()) |
|
} |
|
|
|
func (w *SegmentWAL) write(t WALEntryType, flag uint8, buf []byte) error { |
|
// Cut to the next segment if the entry exceeds the file size unless it would also |
|
// exceed the size of a new segment. |
|
// TODO(gouthamve): Add a test for this case where the commit is greater than segmentSize. |
|
var ( |
|
sz = int64(len(buf)) + 6 |
|
newsz = w.curN + sz |
|
) |
|
// XXX(fabxc): this currently cuts a new file whenever the WAL was newly opened. |
|
// Probably fine in general but may yield a lot of short files in some cases. |
|
if w.cur == nil || w.curN > w.segmentSize || newsz > w.segmentSize && sz <= w.segmentSize { |
|
if err := w.cut(); err != nil { |
|
return err |
|
} |
|
} |
|
n, err := w.writeTo(w.cur, w.crc32, t, flag, buf) |
|
|
|
w.curN += int64(n) |
|
|
|
return err |
|
} |
|
|
|
func (w *SegmentWAL) writeTo(wr io.Writer, crc32 hash.Hash, t WALEntryType, flag uint8, buf []byte) (int, error) { |
|
if len(buf) == 0 { |
|
return 0, nil |
|
} |
|
crc32.Reset() |
|
wr = io.MultiWriter(crc32, wr) |
|
|
|
var b [6]byte |
|
b[0] = byte(t) |
|
b[1] = flag |
|
|
|
binary.BigEndian.PutUint32(b[2:], uint32(len(buf))) |
|
|
|
n1, err := wr.Write(b[:]) |
|
if err != nil { |
|
return n1, err |
|
} |
|
n2, err := wr.Write(buf) |
|
if err != nil { |
|
return n1 + n2, err |
|
} |
|
n3, err := wr.Write(crc32.Sum(b[:0])) |
|
|
|
return n1 + n2 + n3, err |
|
} |
|
|
|
const ( |
|
walSeriesSimple = 1 |
|
walSamplesSimple = 1 |
|
walDeletesSimple = 1 |
|
) |
|
|
|
func (w *SegmentWAL) encodeSeries(buf *encoding.Encbuf, series []record.RefSeries) uint8 { |
|
for _, s := range series { |
|
buf.PutBE64(uint64(s.Ref)) |
|
buf.PutUvarint(len(s.Labels)) |
|
|
|
for _, l := range s.Labels { |
|
buf.PutUvarintStr(l.Name) |
|
buf.PutUvarintStr(l.Value) |
|
} |
|
} |
|
return walSeriesSimple |
|
} |
|
|
|
func (w *SegmentWAL) encodeSamples(buf *encoding.Encbuf, samples []record.RefSample) uint8 { |
|
if len(samples) == 0 { |
|
return walSamplesSimple |
|
} |
|
// Store base timestamp and base reference number of first sample. |
|
// All samples encode their timestamp and ref as delta to those. |
|
// |
|
// TODO(fabxc): optimize for all samples having the same timestamp. |
|
first := samples[0] |
|
|
|
buf.PutBE64(uint64(first.Ref)) |
|
buf.PutBE64int64(first.T) |
|
|
|
for _, s := range samples { |
|
buf.PutVarint64(int64(s.Ref) - int64(first.Ref)) |
|
buf.PutVarint64(s.T - first.T) |
|
buf.PutBE64(math.Float64bits(s.V)) |
|
} |
|
return walSamplesSimple |
|
} |
|
|
|
func (w *SegmentWAL) encodeDeletes(buf *encoding.Encbuf, stones []tombstones.Stone) uint8 { |
|
for _, s := range stones { |
|
for _, iv := range s.Intervals { |
|
buf.PutBE64(uint64(s.Ref)) |
|
buf.PutVarint64(iv.Mint) |
|
buf.PutVarint64(iv.Maxt) |
|
} |
|
} |
|
return walDeletesSimple |
|
} |
|
|
|
// walReader decodes and emits write ahead log entries. |
|
type walReader struct { |
|
logger log.Logger |
|
|
|
files []*segmentFile |
|
cur int |
|
buf []byte |
|
crc32 hash.Hash32 |
|
|
|
curType WALEntryType |
|
curFlag byte |
|
curBuf []byte |
|
lastOffset int64 // offset after last successfully read entry |
|
|
|
err error |
|
} |
|
|
|
func newWALReader(files []*segmentFile, l log.Logger) *walReader { |
|
if l == nil { |
|
l = log.NewNopLogger() |
|
} |
|
return &walReader{ |
|
logger: l, |
|
files: files, |
|
buf: make([]byte, 0, 128*4096), |
|
crc32: newCRC32(), |
|
} |
|
} |
|
|
|
// Err returns the last error the reader encountered. |
|
func (r *walReader) Err() error { |
|
return r.err |
|
} |
|
|
|
func (r *walReader) Read( |
|
seriesf func([]record.RefSeries), |
|
samplesf func([]record.RefSample), |
|
deletesf func([]tombstones.Stone), |
|
) error { |
|
// Concurrency for replaying the WAL is very limited. We at least split out decoding and |
|
// processing into separate threads. |
|
// Historically, the processing is the bottleneck with reading and decoding using only |
|
// 15% of the CPU. |
|
var ( |
|
seriesPool sync.Pool |
|
samplePool sync.Pool |
|
deletePool sync.Pool |
|
) |
|
donec := make(chan struct{}) |
|
datac := make(chan interface{}, 100) |
|
|
|
go func() { |
|
defer close(donec) |
|
|
|
for x := range datac { |
|
switch v := x.(type) { |
|
case []record.RefSeries: |
|
if seriesf != nil { |
|
seriesf(v) |
|
} |
|
//nolint:staticcheck // Ignore SA6002 safe to ignore and actually fixing it has some performance penalty. |
|
seriesPool.Put(v[:0]) |
|
case []record.RefSample: |
|
if samplesf != nil { |
|
samplesf(v) |
|
} |
|
//nolint:staticcheck // Ignore SA6002 safe to ignore and actually fixing it has some performance penalty. |
|
samplePool.Put(v[:0]) |
|
case []tombstones.Stone: |
|
if deletesf != nil { |
|
deletesf(v) |
|
} |
|
//nolint:staticcheck // Ignore SA6002 safe to ignore and actually fixing it has some performance penalty. |
|
deletePool.Put(v[:0]) |
|
default: |
|
level.Error(r.logger).Log("msg", "unexpected data type") |
|
} |
|
} |
|
}() |
|
|
|
var err error |
|
|
|
for r.next() { |
|
et, flag, b := r.at() |
|
|
|
// In decoding below we never return a walCorruptionErr for now. |
|
// Those should generally be caught by entry decoding before. |
|
switch et { |
|
case WALEntrySeries: |
|
var series []record.RefSeries |
|
if v := seriesPool.Get(); v == nil { |
|
series = make([]record.RefSeries, 0, 512) |
|
} else { |
|
series = v.([]record.RefSeries) |
|
} |
|
|
|
err = r.decodeSeries(flag, b, &series) |
|
if err != nil { |
|
err = errors.Wrap(err, "decode series entry") |
|
break |
|
} |
|
datac <- series |
|
|
|
cf := r.current() |
|
for _, s := range series { |
|
if cf.minSeries > s.Ref { |
|
cf.minSeries = s.Ref |
|
} |
|
} |
|
case WALEntrySamples: |
|
var samples []record.RefSample |
|
if v := samplePool.Get(); v == nil { |
|
samples = make([]record.RefSample, 0, 512) |
|
} else { |
|
samples = v.([]record.RefSample) |
|
} |
|
|
|
err = r.decodeSamples(flag, b, &samples) |
|
if err != nil { |
|
err = errors.Wrap(err, "decode samples entry") |
|
break |
|
} |
|
datac <- samples |
|
|
|
// Update the times for the WAL segment file. |
|
cf := r.current() |
|
for _, s := range samples { |
|
if cf.maxTime < s.T { |
|
cf.maxTime = s.T |
|
} |
|
} |
|
case WALEntryDeletes: |
|
var deletes []tombstones.Stone |
|
if v := deletePool.Get(); v == nil { |
|
deletes = make([]tombstones.Stone, 0, 512) |
|
} else { |
|
deletes = v.([]tombstones.Stone) |
|
} |
|
|
|
err = r.decodeDeletes(flag, b, &deletes) |
|
if err != nil { |
|
err = errors.Wrap(err, "decode delete entry") |
|
break |
|
} |
|
datac <- deletes |
|
|
|
// Update the times for the WAL segment file. |
|
cf := r.current() |
|
for _, s := range deletes { |
|
for _, iv := range s.Intervals { |
|
if cf.maxTime < iv.Maxt { |
|
cf.maxTime = iv.Maxt |
|
} |
|
} |
|
} |
|
} |
|
} |
|
close(datac) |
|
<-donec |
|
|
|
if err != nil { |
|
return err |
|
} |
|
if r.Err() != nil { |
|
return errors.Wrap(r.Err(), "read entry") |
|
} |
|
return nil |
|
} |
|
|
|
func (r *walReader) at() (WALEntryType, byte, []byte) { |
|
return r.curType, r.curFlag, r.curBuf |
|
} |
|
|
|
// next returns decodes the next entry pair and returns true |
|
// if it was successful. |
|
func (r *walReader) next() bool { |
|
if r.cur >= len(r.files) { |
|
return false |
|
} |
|
cf := r.files[r.cur] |
|
|
|
// Remember the offset after the last correctly read entry. If the next one |
|
// is corrupted, this is where we can safely truncate. |
|
r.lastOffset, r.err = cf.Seek(0, io.SeekCurrent) |
|
if r.err != nil { |
|
return false |
|
} |
|
|
|
et, flag, b, err := r.entry(cf) |
|
// If we reached the end of the reader, advance to the next one |
|
// and close. |
|
// Do not close on the last one as it will still be appended to. |
|
if err == io.EOF { |
|
if r.cur == len(r.files)-1 { |
|
return false |
|
} |
|
// Current reader completed, close and move to the next one. |
|
if err := cf.Close(); err != nil { |
|
r.err = err |
|
return false |
|
} |
|
r.cur++ |
|
return r.next() |
|
} |
|
if err != nil { |
|
r.err = err |
|
return false |
|
} |
|
|
|
r.curType = et |
|
r.curFlag = flag |
|
r.curBuf = b |
|
return r.err == nil |
|
} |
|
|
|
func (r *walReader) current() *segmentFile { |
|
return r.files[r.cur] |
|
} |
|
|
|
// walCorruptionErr is a type wrapper for errors that indicate WAL corruption |
|
// and trigger a truncation. |
|
type walCorruptionErr struct { |
|
err error |
|
file int |
|
lastOffset int64 |
|
} |
|
|
|
func (e walCorruptionErr) Error() string { |
|
return fmt.Sprintf("%s <file: %d, lastOffset: %d>", e.err, e.file, e.lastOffset) |
|
} |
|
|
|
func (r *walReader) corruptionErr(s string, args ...interface{}) error { |
|
return walCorruptionErr{ |
|
err: errors.Errorf(s, args...), |
|
file: r.cur, |
|
lastOffset: r.lastOffset, |
|
} |
|
} |
|
|
|
func (r *walReader) entry(cr io.Reader) (WALEntryType, byte, []byte, error) { |
|
r.crc32.Reset() |
|
tr := io.TeeReader(cr, r.crc32) |
|
|
|
b := make([]byte, 6) |
|
if n, err := tr.Read(b); err != nil { |
|
return 0, 0, nil, err |
|
} else if n != 6 { |
|
return 0, 0, nil, r.corruptionErr("invalid entry header size %d", n) |
|
} |
|
|
|
var ( |
|
etype = WALEntryType(b[0]) |
|
flag = b[1] |
|
length = int(binary.BigEndian.Uint32(b[2:])) |
|
) |
|
// Exit if we reached pre-allocated space. |
|
if etype == 0 { |
|
return 0, 0, nil, io.EOF |
|
} |
|
if etype != WALEntrySeries && etype != WALEntrySamples && etype != WALEntryDeletes { |
|
return 0, 0, nil, r.corruptionErr("invalid entry type %d", etype) |
|
} |
|
|
|
if length > len(r.buf) { |
|
r.buf = make([]byte, length) |
|
} |
|
buf := r.buf[:length] |
|
|
|
if n, err := tr.Read(buf); err != nil { |
|
return 0, 0, nil, err |
|
} else if n != length { |
|
return 0, 0, nil, r.corruptionErr("invalid entry body size %d", n) |
|
} |
|
|
|
if n, err := cr.Read(b[:4]); err != nil { |
|
return 0, 0, nil, err |
|
} else if n != 4 { |
|
return 0, 0, nil, r.corruptionErr("invalid checksum length %d", n) |
|
} |
|
if exp, has := binary.BigEndian.Uint32(b[:4]), r.crc32.Sum32(); has != exp { |
|
return 0, 0, nil, r.corruptionErr("unexpected CRC32 checksum %x, want %x", has, exp) |
|
} |
|
|
|
return etype, flag, buf, nil |
|
} |
|
|
|
func (r *walReader) decodeSeries(flag byte, b []byte, res *[]record.RefSeries) error { |
|
dec := encoding.Decbuf{B: b} |
|
|
|
for len(dec.B) > 0 && dec.Err() == nil { |
|
ref := chunks.HeadSeriesRef(dec.Be64()) |
|
|
|
lset := make(labels.Labels, dec.Uvarint()) |
|
|
|
for i := range lset { |
|
lset[i].Name = dec.UvarintStr() |
|
lset[i].Value = dec.UvarintStr() |
|
} |
|
sort.Sort(lset) |
|
|
|
*res = append(*res, record.RefSeries{ |
|
Ref: ref, |
|
Labels: lset, |
|
}) |
|
} |
|
if dec.Err() != nil { |
|
return dec.Err() |
|
} |
|
if len(dec.B) > 0 { |
|
return errors.Errorf("unexpected %d bytes left in entry", len(dec.B)) |
|
} |
|
return nil |
|
} |
|
|
|
func (r *walReader) decodeSamples(flag byte, b []byte, res *[]record.RefSample) error { |
|
if len(b) == 0 { |
|
return nil |
|
} |
|
dec := encoding.Decbuf{B: b} |
|
|
|
var ( |
|
baseRef = dec.Be64() |
|
baseTime = dec.Be64int64() |
|
) |
|
|
|
for len(dec.B) > 0 && dec.Err() == nil { |
|
dref := dec.Varint64() |
|
dtime := dec.Varint64() |
|
val := dec.Be64() |
|
|
|
*res = append(*res, record.RefSample{ |
|
Ref: chunks.HeadSeriesRef(int64(baseRef) + dref), |
|
T: baseTime + dtime, |
|
V: math.Float64frombits(val), |
|
}) |
|
} |
|
|
|
if dec.Err() != nil { |
|
return errors.Wrapf(dec.Err(), "decode error after %d samples", len(*res)) |
|
} |
|
if len(dec.B) > 0 { |
|
return errors.Errorf("unexpected %d bytes left in entry", len(dec.B)) |
|
} |
|
return nil |
|
} |
|
|
|
func (r *walReader) decodeDeletes(flag byte, b []byte, res *[]tombstones.Stone) error { |
|
dec := &encoding.Decbuf{B: b} |
|
|
|
for dec.Len() > 0 && dec.Err() == nil { |
|
*res = append(*res, tombstones.Stone{ |
|
Ref: storage.SeriesRef(dec.Be64()), |
|
Intervals: tombstones.Intervals{ |
|
{Mint: dec.Varint64(), Maxt: dec.Varint64()}, |
|
}, |
|
}) |
|
} |
|
if dec.Err() != nil { |
|
return dec.Err() |
|
} |
|
if len(dec.B) > 0 { |
|
return errors.Errorf("unexpected %d bytes left in entry", len(dec.B)) |
|
} |
|
return nil |
|
} |
|
|
|
func deprecatedWALExists(logger log.Logger, dir string) (bool, error) { |
|
// Detect whether we still have the old WAL. |
|
fns, err := sequenceFiles(dir) |
|
if err != nil && !os.IsNotExist(err) { |
|
return false, errors.Wrap(err, "list sequence files") |
|
} |
|
if len(fns) == 0 { |
|
return false, nil // No WAL at all yet. |
|
} |
|
// Check header of first segment to see whether we are still dealing with an |
|
// old WAL. |
|
f, err := os.Open(fns[0]) |
|
if err != nil { |
|
return false, errors.Wrap(err, "check first existing segment") |
|
} |
|
defer f.Close() |
|
|
|
var hdr [4]byte |
|
if _, err := f.Read(hdr[:]); err != nil && err != io.EOF { |
|
return false, errors.Wrap(err, "read header from first segment") |
|
} |
|
// If we cannot read the magic header for segments of the old WAL, abort. |
|
// Either it's migrated already or there's a corruption issue with which |
|
// we cannot deal here anyway. Subsequent attempts to open the WAL will error in that case. |
|
if binary.BigEndian.Uint32(hdr[:]) != WALMagic { |
|
return false, nil |
|
} |
|
return true, nil |
|
} |
|
|
|
// MigrateWAL rewrites the deprecated write ahead log into the new format. |
|
func MigrateWAL(logger log.Logger, dir string) (err error) { |
|
if logger == nil { |
|
logger = log.NewNopLogger() |
|
} |
|
if exists, err := deprecatedWALExists(logger, dir); err != nil || !exists { |
|
return err |
|
} |
|
level.Info(logger).Log("msg", "Migrating WAL format") |
|
|
|
tmpdir := dir + ".tmp" |
|
if err := os.RemoveAll(tmpdir); err != nil { |
|
return errors.Wrap(err, "cleanup replacement dir") |
|
} |
|
repl, err := wal.New(logger, nil, tmpdir, false) |
|
if err != nil { |
|
return errors.Wrap(err, "open new WAL") |
|
} |
|
|
|
// It should've already been closed as part of the previous finalization. |
|
// Do it once again in case of prior errors. |
|
defer func() { |
|
if err != nil { |
|
repl.Close() |
|
} |
|
}() |
|
|
|
w, err := OpenSegmentWAL(dir, logger, time.Minute, nil) |
|
if err != nil { |
|
return errors.Wrap(err, "open old WAL") |
|
} |
|
defer w.Close() |
|
|
|
rdr := w.Reader() |
|
|
|
var ( |
|
enc record.Encoder |
|
b []byte |
|
) |
|
decErr := rdr.Read( |
|
func(s []record.RefSeries) { |
|
if err != nil { |
|
return |
|
} |
|
err = repl.Log(enc.Series(s, b[:0])) |
|
}, |
|
func(s []record.RefSample) { |
|
if err != nil { |
|
return |
|
} |
|
err = repl.Log(enc.Samples(s, b[:0])) |
|
}, |
|
func(s []tombstones.Stone) { |
|
if err != nil { |
|
return |
|
} |
|
err = repl.Log(enc.Tombstones(s, b[:0])) |
|
}, |
|
) |
|
if decErr != nil { |
|
return errors.Wrap(err, "decode old entries") |
|
} |
|
if err != nil { |
|
return errors.Wrap(err, "write new entries") |
|
} |
|
// We explicitly close even when there is a defer for Windows to be |
|
// able to delete it. The defer is in place to close it in-case there |
|
// are errors above. |
|
if err := w.Close(); err != nil { |
|
return errors.Wrap(err, "close old WAL") |
|
} |
|
if err := repl.Close(); err != nil { |
|
return errors.Wrap(err, "close new WAL") |
|
} |
|
if err := fileutil.Replace(tmpdir, dir); err != nil { |
|
return errors.Wrap(err, "replace old WAL") |
|
} |
|
return nil |
|
}
|
|
|