Optimize histogram iterators
Histogram iterators allocate new objects in the AtHistogram and
AtFloatHistogram methods, which makes calculating rates over long
ranges expensive.
In #13215 we allowed an existing object to be reused
when converting an integer histogram to a float histogram. This commit follows
the same idea and allows injecting an existing object in the AtHistogram and
AtFloatHistogram methods. When the injected value is nil, iterators allocate
new histograms, otherwise they populate and return the injected object.
The commit also adds a CopyTo method to Histogram and FloatHistogram which
is used in the BufferedIterator to overwrite items in the ring instead of making
new copies.
Note that a specialized HPoint pool is needed for all of this to work
(`matrixSelectorHPool`).
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Signed-off-by: Filip Petkovski <filip.petkovsky@gmail.com>
Co-authored-by: George Krajcsovits <krajorama@users.noreply.github.com>
Don't calculate postings beforehand: we may not need them. If all
matchers are for the requested label, we can just filter its values.
Also, if there are no values at all, no need to run any kind of
logic.
Also add more labelValuesWithMatchers benchmarks
Signed-off-by: Oleg Zaytsev <mail@olegzaytsev.com>
This functionality is needed in downstream projects because they have a
separate component that does compaction.
Upstreaming
7c8e9a2a76/tsdb/compact.go (L323-L325).
Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>
* tsdb/{index,compact}: allow using custom postings encoding format
We would like to experiment with a different postings encoding format in
Thanos so in this change I am proposing adding another argument to
`NewWriter` which would allow users to change the format if needed.
Also, wire the leveled compactor so that it would be possible to change
the format there too.
Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>
* tsdb/compact: use a struct for leveled compactor options
As discussed on Slack, let's use a struct for the options in leveled
compactor.
Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>
* tsdb: make changes after Bryan's review
- Make changes less intrusive
- Turn the postings encoder type into a function
- Add NewWriterWithEncoder()
Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>
---------
Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>
This reverts commit 2ddb3596ef.
Various tests are failing in CI after this change; reverting to free up
other work.
Signed-off-by: Bryan Boreham <bjboreham@gmail.com>
They are used in multiple repos, so common is a better place for them.
Several packages now don't depend on `model/textparse`, e.g.
`storage/remote`.
Also remove `metadata` struct from `api.go`, since it was identical to
a struct in the `metadata` package.
Signed-off-by: Bryan Boreham <bjboreham@gmail.com>
In https://github.com/prometheus/prometheus/pull/13276 we started reusing float histogram objects to reduce allocations in PromQL.
That PR introduces a bug where histogram pointers gets copied to the beginning of the histograms slice,
but are still kept in the end of the slice. When a new histogram is read into the last element,
it can overwrite a previous element because the pointer is the same.
This commit fixes the issue by moving outdated points to the end of the slice
so that we don't end up with duplicate pointers in the same buffer. In other words,
the slice gets rotated so that old objects can get reused.
Signed-off-by: Filip Petkovski <filip.petkovsky@gmail.com>
Digging around the TSDB code and I've found that this flag is unused so
let's remove it.
Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>
* Append created timestamps.
Signed-off-by: Arthur Silva Sens <arthur.sens@coralogix.com>
* Log when created timestamps are ignored
Signed-off-by: Arthur Silva Sens <arthur.sens@coralogix.com>
* Proposed changes to Append CT PR.
Changes:
* Changed textparse Parser interface for consistency and robustness.
* Changed CT interface to be more explicit and handle validation.
* Simplified test, change scrapeManager to allow testability.
* Added TODOs.
Signed-off-by: bwplotka <bwplotka@gmail.com>
* Updates.
Signed-off-by: bwplotka <bwplotka@gmail.com>
* Addressed comments.
Signed-off-by: bwplotka <bwplotka@gmail.com>
* Refactor head_appender test
Signed-off-by: Arthur Silva Sens <arthur.sens@coralogix.com>
* Fix linter issues
Signed-off-by: Arthur Silva Sens <arthur.sens@coralogix.com>
* Use model.Sample in head appender test
Signed-off-by: Arthur Silva Sens <arthur.sens@coralogix.com>
---------
Signed-off-by: Arthur Silva Sens <arthur.sens@coralogix.com>
Signed-off-by: bwplotka <bwplotka@gmail.com>
Co-authored-by: bwplotka <bwplotka@gmail.com>
It's faster.
Note change to test - instead of requiring that the data structure is
identical to `EmptyPostings()`, check that calling `Next()` returns
false, which implies it was empty.
Also the check for context cancellation during initialization was
removed. Initialization should be a small portion of the work done
during merge, so it's not worth plumbing a context argument through.
Signed-off-by: Bryan Boreham <bjboreham@gmail.com>
The 'ToFloat' method on integer histograms currently allocates new memory
each time it is called.
This commit adds an optional *FloatHistogram parameter that can be used
to reuse span and bucket slices. It is up to the caller to make sure the
input float histogram is not used anymore after the call.
Signed-off-by: Filip Petkovski <filip.petkovsky@gmail.com>
* Fix histogram append errors
We should check counterReset condition rather than okToAppend because if
there's a counter reset, okToAppend is always set to false.
Signed-off-by: Fiona Liao <fiona.y.liao@gmail.com>
When no samples are returned in a chunk because all the samples have
been deleted, the chunk iterator then stops without iterating through
any remaining chunks.
Signed-off-by: Fiona Liao <fiona.y.liao@gmail.com>
* Fix tsdb.stripeSeries.gc so it handles conflicts properly
tsdb.stripeSeries.gc needs to prune seriesHashmap.conflicts first,
otherwise seriesHashmap replaces the unique field with the first among
the conflicts. Also add regression test.
Signed-off-by: Arve Knudsen <arve.knudsen@gmail.com>
* TestStripeSeries_gc: Support stringlabels, don't use internals
Signed-off-by: Arve Knudsen <arve.knudsen@gmail.com>
---------
Signed-off-by: Arve Knudsen <arve.knudsen@gmail.com>
The ChunkReader interface's Chunk() has been changed to ChunkOrIterable().
This is a precursor to OOO native histogram support - with OOO native histograms, the chunks.Meta passed to Chunk() can result in multiple chunks being returned rather than just a single chunk (e.g. if oooMergedChunk has a counter reset in the middle).
To support this, ChunkOrIterable() requires either a single chunk or an iterable to be returned. If an iterable is returned, the caller has the responsibility of converting the samples from the iterable into possibly multiple chunks. The OOOHeadChunkReader now returns an iterable rather than a chunk to prepare for the native histograms case. Also as a beneficial side effect, oooMergedChunk and boundedChunk has been simplified as they only need to implement the Iterable interface now, not the full Chunk interface.
---------
Signed-off-by: Fiona Liao <fiona.y.liao@gmail.com>
Co-authored-by: George Krajcsovits <krajorama@users.noreply.github.com>
* Fix tsdb.seriesHashmap.set by making receiver a pointer
The method tsdb.seriesHashmap.set currently doesn't set the conflicts
field properly, due to the receiver being a non-pointer. Fix by turning
the receiver into a pointer, and add a corresponding regression test.
Signed-off-by: Arve Knudsen <arve.knudsen@gmail.com>
* Add failing test.
Signed-off-by: Charles Korn <charles.korn@grafana.com>
* Don't run OOO head garbage collection while reads are running.
Signed-off-by: Charles Korn <charles.korn@grafana.com>
* Add further test cases for different order of operations.
Signed-off-by: Charles Korn <charles.korn@grafana.com>
* Ensure all queriers are closed if `DB.blockChunkQuerierForRange()` fails.
Signed-off-by: Charles Korn <charles.korn@grafana.com>
* Ensure all queriers are closed if `DB.Querier()` fails.
Signed-off-by: Charles Korn <charles.korn@grafana.com>
* Invert error handling in `DB.Querier()` and `DB.blockChunkQuerierForRange()` to make it clearer
Signed-off-by: Charles Korn <charles.korn@grafana.com>
* Ensure that queries that touch OOO data can't block OOO head garbage collection forever.
Signed-off-by: Charles Korn <charles.korn@grafana.com>
* Address PR feedback: fix parameter name in comment
Co-authored-by: Jesus Vazquez <jesusvazquez@users.noreply.github.com>
Signed-off-by: Charles Korn <charleskorn@users.noreply.github.com>
* Address PR feedback: use `lastGarbageCollectedMmapRef`
Signed-off-by: Charles Korn <charles.korn@grafana.com>
* Address PR feedback: ensure pending reads are cleaned up if creating an OOO querier fails
Signed-off-by: Charles Korn <charles.korn@grafana.com>
---------
Signed-off-by: Charles Korn <charles.korn@grafana.com>
Signed-off-by: Charles Korn <charleskorn@users.noreply.github.com>
Co-authored-by: Jesus Vazquez <jesusvazquez@users.noreply.github.com>
* Make head block ULIDs descriptive
As far as I understand, these ULIDs aren't persisted anywhere, so it
should be safe to change them.
When debugging an issue, seeing an ULID like
`2ZBXFNYVVFDXFPGSB1CHFNYQTZ` or `33DXR7JA39CHDKMQ9C40H6YVVF` isn't very
helpful, so I propose to make them readable in their ULID string
version.
Signed-off-by: Oleg Zaytsev <mail@olegzaytsev.com>
* Set a different ULID for RangeHead
Signed-off-by: Oleg Zaytsev <mail@olegzaytsev.com>
---------
Signed-off-by: Oleg Zaytsev <mail@olegzaytsev.com>
Fix and improve ingesting exemplars for native histograms.
See code comment for a detailed explanation of the algorithm.
Note that this changes the current behavior for all kind of samples slightly: We now allow exemplars with the same timestamp as during the last scrape if the value or the labels have changed.
Also note that we now do not ingest exemplars without timestamps for native histograms anymore.
Signed-off-by: Jeanette Tan <jeanette.tan@grafana.com>
Signed-off-by: György Krajcsovits <gyorgy.krajcsovits@grafana.com>
Co-authored-by: Björn Rabenstein <github@rabenste.in>
---------
Signed-off-by: Jeanette Tan <jeanette.tan@grafana.com>
Signed-off-by: György Krajcsovits <gyorgy.krajcsovits@grafana.com>
Signed-off-by: zenador <zenador@users.noreply.github.com>
Co-authored-by: György Krajcsovits <gyorgy.krajcsovits@grafana.com>
Co-authored-by: Björn Rabenstein <github@rabenste.in>
* Labels: reduce allocations when creating from TSDB
When reading the WAL, by passing references into the buffer we can avoid
copying strings under `-tags stringlabels`.
Signed-off-by: Bryan Boreham <bjboreham@gmail.com>
* Fix panic during tsdb Commit
Fixes the following
panic: runtime error: invalid memory address or nil pointer dereference
[signal SIGSEGV: segmentation violation code=0x1 addr=0x20 pc=0x19deb45]
goroutine 651118930 [running]:
github.com/prometheus/prometheus/tsdb.(*headAppender).Commit(0xc19100f7c0)
/drone/src/vendor/github.com/prometheus/prometheus/tsdb/head_append.go:855 +0x245
github.com/prometheus/prometheus/tsdb.dbAppender.Commit({{0x35bd6f0?, 0xc19100f7c0?}, 0xc000fa4c00?})
/drone/src/vendor/github.com/prometheus/prometheus/tsdb/db.go:1159 +0x2f
We theorize that the panic happened due the the series referenced by the
exemplar being removed between AppendExemplar and Commit due to being idle.
Signed-off-by: György Krajcsovits <gyorgy.krajcsovits@grafana.com>
When samples are committed in the head, they are also written to the WAL.
The order of WAL records should be sample then exemplar, but this was
not the case for native histogram samples. This PR fixes that.
The problem with the wrong order is that remote write reads the WAL and
sends the recorded timeseries in the WAL order, which means exemplars
arrived before histogram samples. If the receiving side is Prometheus
TSDB and the series has not existed before then the exemplar does not
currently create the series. Which means the exemplar is rejected and lost.
Signed-off-by: György Krajcsovits <gyorgy.krajcsovits@grafana.com>
Filip Petkovski