This is a fairly easy attempt to dynamically evict chunks based on the
heap size. A target heap size has to be set as a command line flage,
so that users can essentially say "utilize 4GiB of RAM, and please
don't OOM".
The -storage.local.max-chunks-to-persist and
-storage.local.memory-chunks flags are deprecated by this
change. Backwards compatibility is provided by ignoring
-storage.local.max-chunks-to-persist and use
-storage.local.memory-chunks to set the new
-storage.local.target-heap-size to a reasonable (and conservative)
value (both with a warning).
This also makes the metrics intstrumentation more consistent (in
naming and implementation) and cleans up a few quirks in the tests.
Answers to anticipated comments:
There is a chance that Go 1.9 will allow programs better control over
the Go memory management. I don't expect those changes to be in
contradiction with the approach here, but I do expect them to
complement them and allow them to be more precise and controlled. In
any case, once those Go changes are available, this code has to be
revisted.
One might be tempted to let the user specify an estimated value for
the RSS usage, and then internall set a target heap size of a certain
fraction of that. (In my experience, 2/3 is a fairly safe bet.)
However, investigations have shown that RSS size and its relation to
the heap size is really really complicated. It depends on so many
factors that I wouldn't even start listing them in a commit
description. It depends on many circumstances and not at least on the
risk trade-off of each individual user between RAM utilization and
probability of OOMing during a RAM usage peak. To not add even more to
the confusion, we need to stick to the well-defined number we also use
in the targeting here, the sum of the sizes of heap objects.
Currently, if a series stops to exist, its head chunk will be kept
open for an hour. That prevents it from being persisted. Which
prevents it from being evicted. Which prevents the series from being
archived.
Most of the time, once no sample has been added to a series within the
staleness limit, we can be pretty confident that this series will not
receive samples anymore. The whole chain as described above can be
started after 5m instead of 1h. In the relaxed case, this doesn't
change a lot as the head chunk timeout is only checked during series
maintenance, and usually, a series is only maintained every six
hours. However, there is the typical scenario where a large service is
deployed, the deoply turns out to be bad, and then it is deployed
again within minutes, and quite quickly the number of time series has
tripled. That's the point where the Prometheus server is stressed and
switches (rightfully) into rushed mode. In that mode, time series are
processed as quickly as possible, but all of that is in vein if all of
those recently ended time series cannot be persisted yet for another
hour. In that scenario, this change will help most, and it's exactly
the scenario where help is most desperately needed.
Each remote write endpoint gets its own set of relabeling rules.
This is based on the (yet-to-be-merged)
https://github.com/prometheus/prometheus/pull/2419, which removes legacy
remote write implementations.
This removes legacy support for specific remote storage systems in favor
of only offering the generic remote write protocol. An example bridge
application that translates from the generic protocol to each of those
legacy backends is still provided at:
documentation/examples/remote_storage/remote_storage_bridge
See also https://github.com/prometheus/prometheus/issues/10
The next step in the plan is to re-add support for multiple remote
storages.
This is another corner-case that was previously never exercised
because the rewriting of a series file was never prevented by the
shrink ratio.
Scenario: There is an existing series on disk, which is archived. If a
new sample comes in for that file, a new chunk in memory is created,
and the chunkDescsOffset is set to -1. If series maintenance happens
before the series has at least one chunk to persist _and_ an
insufficient chunks on disk is old enough for purging (so that the
shrink ratio kicks in), dropAndPersistChunks would return 0, but it
should return the chunk length of the series file.
Also, in that code path, set chunkDescsOffset to 0 rather than -1 in
case of "dropped more chunks from persistence than from memory" so
that no other weird things happen before the series is quarantined for
good.
The append call may reuse cds, and thus change its len.
(In practice, this wouldn't happen as cds should have len==cap.
Still, the previous order of lines was problematic.)
This decreases checkpoint size by not checkpointing things
that don't actually need checkpointing.
This is fully compatible with the v2 checkpoint format,
as it makes series appear as though the only chunksdescs
in memory are those that need persisting.
With this change the scraping caches series references and only
allocates label sets if it has to retrieve a new reference.
pkg/textparse is used to do the conditional parsing and reduce
allocations from 900B/sample to 0 in the general case.
Add metrics around checkpointing and persistence
* Add a metric to say if checkpointing is happening,
and another to track total checkpoint time and count.
This breaks the existing prometheus_local_storage_checkpoint_duration_seconds
by renaming it to prometheus_local_storage_checkpoint_last_duration_seconds
as the former name is more appropriate for a summary.
* Add metric for last checkpoint size.
* Add metric for series/chunks processed by checkpoints.
For long checkpoints it'd be useful to see how they're progressing.
* Add metric for dirty series
* Add metric for number of chunks persisted per series.
You can get the number of chunks from chunk_ops,
but not the matching number of series. This helps determine
the size of the writes being made.
* Add metric for chunks queued for persistence
Chunks created includes both chunks that'll need persistence
and chunks read in for queries. This only includes chunks created
for persistence.
* Code review comments on new persistence metrics.
When a large Prometheus starts up fresh it can take many minutes
to warmup and clear out the index queue. A larger queue means less
blocking, bigger batches and cuts down startup time by ~50%.
Keeping these around has two problems:
1) Each desc takes 64 bytes, 10 of them is 640B. This is a lot of
overhead on a 1024 byte chunk.
2) It can take well over a week to reach a point where this and thus
Prometheus memory usage as a whole enters steady state. This makes RAM
estimation very hard for users, and makes it difficult to investigate
things like memory fragmentation.
Instead we'll wipe them during each memory series maintenance cycle, and
if a query pulls them in they'll hang around as cache until the next
cycle.
Two cases:
- An unarchived metric must have at least one chunk desc loaded upon
unarchival. Otherwise, the file is gone or has size 0, which is an
inconsistency (because the series is still indexed in the archive
index). Hence, quarantining is triggered.
- If loading the chunk descs of a series with a known chunkDescsOffset
(i.e. != -1), the number of chunks loaded must be equal to
chunkDescsOffset. If not, there is a data corruption. An error is
returned, which leads to qurantining.
In any case, there is a guard added to not access the 1st element of
an empty chunkDescs slice. (That's what triggered the crashes in issue
2249.) A time series with unknown chunkDescsOffset and no chunks in
memory and no chunks on disk either could trigger that case. I would
assume such a "null series" doesn't exist, but it's not entirely
unthinkable and unreasonable to happen (perhaps in future uses of the
storage). (Create a series, and then something tries to preload chunks
before the first sample is added.)
This extracts Querier as an instantiateable and closeable object
rather than just defining extending methods of the storage interface.
This improves composability and allows abstracting query transactions,
which can be useful for transaction-level caches, consistent data views,
and encapsulating teardown.
When using the chunking code in other projects (both Weave Prism and
ChronixDB ingester), you sometimes want to know how well you are
utilizing your chunks when closing/storing them.
These more specific methods have replaced `metricForLabelMatchers`
in cases where its `map[fingerprint]metric` result type was
not necessary or was used as an intermediate step
Avoids duplicated calls to `seriesForRange` from
`QueryRange` and `QueryInstant` methods.
This is a followup to https://github.com/prometheus/prometheus/pull/2011.
This publishes more of the methods and other names of the chunk code and
moves the chunk code to its own package. There's some unavoidable
ugliness: the chunk and chunkDesc metrics are used by both packages, so
I had to move them to the chunk package. That isn't great, but I don't
see how to do it better without a larger redesign of everything. Same
for the evict requests and some other types.
* Add config, HTTP Basic Auth and TLS support to the generic write path.
- Move generic write path configuration to the config file
- Factor out config.TLSConfig -> tlf.Config translation
- Support TLSConfig for generic remote storage
- Rename Run to Start, and make it non-blocking.
- Dedupe code in httputil for TLS config.
- Make remote queue metrics global.
This is based on https://github.com/prometheus/prometheus/pull/1997.
This adds contexts to the relevant Storage methods and already passes
PromQL's new per-query context into the storage's query methods.
The immediate motivation supporting multi-tenancy in Frankenstein, but
this could also be used by Prometheus's normal local storage to support
cancellations and timeouts at some point.
CPUs have to serialise write access to a single cache line
effectively reducing level of possible parallelism. Placing
mutexes on different cache lines avoids this problem.
Most gains will be seen on NUMA servers where CPU interconnect
traffic is especially expensive
Before:
go test . -run none -bench BenchmarkFingerprintLocker
BenchmarkFingerprintLockerParallel-4 2000000 932 ns/op
BenchmarkFingerprintLockerSerial-4 30000000 49.6 ns/op
After:
go test . -run none -bench BenchmarkFingerprintLocker
BenchmarkFingerprintLockerParallel-4 3000000 569 ns/op
BenchmarkFingerprintLockerSerial-4 30000000 51.0 ns/op
My aim is to support the new grpc generic write path in Frankenstein. On the surface this seems easy - however I've hit a number of problems that make me think it might be better to not use grpc just yet.
The explanation of the problems requires a little background. At weave, traffic to frankenstein need to go through a couple of services first, for SSL and to be authenticated. So traffic goes:
internet -> frontend -> authfe -> frankenstein
- The frontend is Nginx, and adds/removes SSL. Its done this way for legacy reasons, so the certs can be managed in one place, although eventually we imagine we'll merge it with authfe. All traffic from frontend is sent to authfe.
- Authfe checks the auth tokens / cookie etc and then picks the service to forward the RPC to.
- Frankenstein accepts the reads and does the right thing with them.
First problem I hit was Nginx won't proxy http2 requests - it can accept them, but all calls downstream are http1 (see https://trac.nginx.org/nginx/ticket/923). This wasn't such a big deal, so it now looks like:
internet --(grpc/http2)--> frontend --(grpc/http1)--> authfe --(grpc/http1)--> frankenstein
Next problem was golang grpc server won't accept http1 requests (see https://groups.google.com/forum/#!topic/grpc-io/JnjCYGPMUms). It is possible to link a grpc server in with a normal go http mux, as long as the mux server is serving over SSL, as the golang http client & server won't do http2 over anything other than an SSL connection. This would require making all our service to service comms SSL. So I had a go a writing a grpc http1 server, and got pretty far. But is was a bit of a mess.
So finally I thought I'd make a separate grpc frontend for this, running in parallel with the frontend/authfe combo on a different port - and first up I'd need a grpc reverse proxy. Ideally we'd have some nice, generic reverse proxy that only knew about a map from service names -> downstream service, and didn't need to decode & re-encode every request as it went through. It seems like this can't be done with golang's grpc library - see https://github.com/mwitkow/grpc-proxy/issues/1.
And then I was surprised to find you can't do grpc from browsers! See http://www.grpc.io/faq/ - not important to us, but I'm starting to question why we decided to use grpc in the first place?
It would seem we could have most of the benefits of grpc with protos over HTTP, and this wouldn't preclude moving to grpc when its a bit more mature? In fact, the grcp FAQ even admits as much:
> Why is gRPC better than any binary blob over HTTP/2?
> This is largely what gRPC is on the wire.
This adds a flag -storage.local.engine which allows turning off local
storage in Prometheus. Instead of adding if-conditions and nil checks to
all parts of Prometheus that deal with Prometheus's local storage
(including the web interface), disabling local storage simply means
replacing the normal local storage with a noop version that throws
samples away and returns empty query results. We also don't add the noop
storage to the fanout appender to decrease internal overhead.
Instead of returning empty results, an alternate behavior could be to
return errors on any query that point out that the local storage is
disabled. Not sure which one is more preferable, so I went with the
empty result option for now.
By splitting the single queue into multiple queues and flushing each individual queue in serially (and all queues in parallel), we can guarantee to preserve the order of timestampsin samples sent to downstream systems.
- fold metric name into labels
- return initialization errors back to main
- add snappy compression
- better context handling
- pre-allocation of labels
- remove generic naming
- other cleanups
This uses a new proto format, with scope for multiple samples per
timeseries in future. This will allow users to pump samples out to
whatever they like without having to change the core Prometheus code.
There's also an example receiver to save users figuring out the
boilerplate themselves.
Turns out its valid to have an overall chunk which is smaller than the
full doubleDeltaHeaderBytes size -- if it has a single sample, it
doesn't fill the whole header. Updated unmarshalling check to respect
this.
This is (hopefully) a fix for #1653
Specifically, this makes it so that if the length for the stored
delta/doubleDelta is somehow corrupted to be too small, the attempt to
unmarshal will return an error.
The current (broken) behavior is to return a malformed chunk, which can
then lead to a panic when there is an attempt to read header values.
The referenced issue proposed creating chunks with a minimum length -- I
instead opted to just error on the attempt to unmarshal, since I'm not
clear on how it could be safe to proceed when the length is
incorrect/unknown.
The issue also talked about possibly "quarantining series", but I don't
know the surrounding code well enough to understand how to make that
happen.
Specifically, the TestSpawnNotMoreThanMaxConcurrentSendsGoroutines was failing on a fresh checkout of master.
The test had a race condition -- it would only pass if one of the
spawned goroutines happened to very quickly pull a set of samples off an
internal queue.
This patch rewrites the test so that it deterministically waits until
all samples have been pulled off that queue. In case of errors, it also
now reports on the difference between what it expected and what it found.
I verified that, if the code under test is deliberately broken, the test
successfully reports on that.
See discussion in
https://groups.google.com/forum/#!topic/prometheus-developers/bkuGbVlvQ9g
The main idea is that the user of a storage shouldn't have to deal with
fingerprints anymore, and should not need to do an individual preload
call for each metric. The storage interface needs to be made more
high-level to not expose these details.
This also makes it easier to reuse the same storage interface for remote
storages later, as fewer roundtrips are required and the fingerprint
concept doesn't work well across the network.
NOTE: this deliberately gets rid of a small optimization in the old
query Analyzer, where we dedupe instants and ranges for the same series.
This should have a minor impact, as most queries do not have multiple
selectors loading the same series (and at the same offset).
tl;dr: This is not a fundamental solution to the indexing problem
(like tindex is) but it at least avoids utilizing the intersection
problem to the greatest possible amount.
In more detail:
Imagine the following query:
nicely:aggregating:rule{job="foo",env="prod"}
While it uses a nicely aggregating recording rule (which might have a
very low cardinality), Prometheus still intersects the low number of
fingerprints for `{__name__="nicely:aggregating:rule"}` with the many
thousands of fingerprints matching `{job="foo"}` and with the millions
of fingerprints matching `{env="prod"}`. This totally innocuous query
is dead slow if the Prometheus server has a lot of time series with
the `{env="prod"}` label. Ironically, if you make the query more
complicated, it becomes blazingly fast:
nicely:aggregating:rule{job=~"foo",env=~"prod"}
Why so? Because Prometheus only intersects with non-Equal matchers if
there are no Equal matchers. That's good in this case because it
retrieves the few fingerprints for
`{__name__="nicely:aggregating:rule"}` and then starts right ahead to
retrieve the metric for those FPs and checking individually if they
match the other matchers.
This change is generalizing the idea of when to stop intersecting FPs
and go into "retrieve metrics and check them individually against
remaining matchers" mode:
- First, sort all matchers by "expected cardinality". Matchers
matching the empty string are always worst (and never used for
intersections). Equal matchers are in general consider best, but by
using some crude heuristics, we declare some better than others
(instance labels or anything that looks like a recording rule).
- Then go through the matchers until we hit a threshold of remaining
FPs in the intersection. This threshold is higher if we are already
in the non-Equal matcher area as intersection is even more expensive
here.
- Once the threshold has been reached (or we have run out of matchers
that do not match the empty string), start with "retrieve metrics
and check them individually against remaining matchers".
A beefy server at SoundCloud was spending 67% of its CPU time in index
lookups (fingerprintsForLabelPairs), serving mostly a dashboard that
is exclusively built with recording rules. With this change, it spends
only 35% in fingerprintsForLabelPairs. The CPU usage dropped from 26
cores to 18 cores. The median latency for query_range dropped from 14s
to 50ms(!). As expected, higher percentile latency didn't improve that
much because the new approach is _occasionally_ running into the worst
case while the old one was _systematically_ doing so. The 99th
percentile latency is now about as high as the median before (14s)
while it was almost twice as high before (26s).
If the chunks of a series in the checkpoint are all older then the
latest chunk on disk, the head chunk is persisted and therefore has to
be declared closed.
It would be great to have a test for this, but that would require more
plumbing, subject of #447.
PromQL only requires a much narrower interface than local.Storage in
order to run queries. Narrower interfaces are easier to replace and
test, too.
We could also change the web interface to use local.Querier, except that
we'll probably use appending functions from there in the future.
On Windows, it is not possible to rename or delete a file that is
currerntly open. This change closes the file in dropAndPersistChunks
before it tries to delete it, or rename the temporary file to it.
With a lot of series accessed in a short timeframe (by a query, a
large scrape, checkpointing, ...), there is actually quite a
significant amount of lock contention if something similar is running
at the same time.
In those cases, the number of locks needs to be increased.
On the same front, as our fingerprints don't have a lot of entropy, I
introduced some additional shuffling. With the current state, anly
changes in the least singificant bits of a FP would matter.
But only on DEBUG level.
Also, count and report the two cases of out-of-order timestamps on the
one hand and same timestamp but different value on the other hand
separately.
Before, we checkpointed after every newly detected fingerprint
collision, which is not a problem as long as collisions are
rare. However, with a sufficient number of metrics or particular
nature of the data set, there might be a lot of collisions, all to be
detected upon the first set of scrapes, and then the checkpointing
after each detection will take a quite long time (it's O(n²),
essentially).
Since we are rebuilding the fingerprint mapping during crash recovery,
the previous, very conservative approach didn't even buy us
anything. We only ever read from the checkpoint file after a clean
shutdown, so the only time we need to write the checkpoint file is
during a clean shutdown.
Prometheus is Apache 2 licensed, and most source files have the
appropriate copyright license header, but some were missing it without
apparent reason. Correct that by adding it.
The chunk encoding was hardcoded there because it mostly doesn't
matter what encoding is chosen in that test. Since type 1 is
battle-hardened enough, I'm switching to type 2 here so that we can
catch unexpected problems as a byproduct. My expectation is that the
chunk encoding doesn't matter anyway, as said, but then "unexpected
problems" contains the word "unexpected".
So far, the last sample in a chunk was saved twice. That's required
for adding more samples as we need to know the last sample added to
add more samples without iterating through the whole chunk. However,
once the last sample was added to the chunk before it's full, there is
no need to save it twice. Thus, the very last sample added to a chunk
can _only_ be saved in the header fields for the last sample. The
chunk has to be identifiable as closed, then. This information has
been added to the flags byte.
This improves fuzz testing in two ways:
(1) More realistic time stamps. So far, the most common case in
practice was very rare in the test: Completely regular increases of
the timestamp.
(2) Verify samples by scanning through the whole relevant section of
the series.
For Gorilla-like chunks, this showed two things:
(1) With more regularly increasing time stamps, BenchmarkFuzz is
essentially as fast as with the traditional chunks:
```
BenchmarkFuzzChunkType0-8 2 972514684 ns/op 83426196 B/op 2500044 allocs/op
BenchmarkFuzzChunkType1-8 2 971478001 ns/op 82874660 B/op 2512364 allocs/op
BenchmarkFuzzChunkType2-8 2 999339453 ns/op 76670636 B/op 2366116 allocs/op
```
(2) There was a bug related to when and how the chunk footer is
overwritten to make use for the last sample. This wasn't exposed by
random access as the last sample of a chunk is retrieved from the
values in the header in that case.
This is not a verbatim implementation of the Gorilla encoding. First
of all, it could not, even if we wanted, because Prometheus has a
different chunking model (constant size, not constant time). Second,
this adds a number of changes that improve the encoding in general or
at least for the specific use case of Prometheus (and are partially
only possible in the context of Prometheus). See comments in the code
for details.
It is now also used in label matching, so the name of the metric
changed from `prometheus_local_storage_invalid_preload_requests_total`
to `non_existent_series_matches_total'.
Only return an error where callers are doing something with it except
simply logging and ignoring.
All the errors touched in this commit flag the storage as dirty
anyway, and that fact is logged anyway. So most of what is being
removed here is just log spam.
As discussed earlier, the class of errors that flags the storage as
dirty signals fundamental corruption, no even bubbling up a one-time
warning to the user (e.g. about incomplete results) isn't helping much
because _anything_ happening in the storage has to be doubted from
that point on (and in fact retroactively into the past, too). Flagging
the storage dirty, and alerting on it (plus marking the state in the
web UI) is the only way I can see right now.
As a byproduct, I cleaned up the setDirty method a bit and improved
the logged errors.
WIP: This needs more tests.
It now gets a from and through value, which it may opportunistically
use to optimize the retrieval. With possible future range indices,
this could be used in a very efficient way. This change merely applies
some easy checks, which should nevertheless solve the use case of
heavy rule evaluations on servers with a lot of series churn.
Idea is the following:
- Only archive series that are at least as old as the headChunkTimeout
(which was already extremely unlikely to happen).
- Then maintain a high watermark for the last archival, i.e. no
archived series has a sample more recent than that watermark.
- Any query that doesn't reach to a time before that watermark doesn't
have to touch the archive index at all. (A production server at
Soundcloud with the aforementioned series churn and heavy rule
evaluations spends 50% of its CPU time in archive index
lookups. Since rule evaluations usually only touch very recent
values, most of those lookup should disappear with this change.)
- Federation with a very broad label matcher will profit from this,
too.
As a byproduct, the un-needed MetricForFingerprint method was removed
from the Storage interface.
This finally extracts all the common code of the two chunk iterators
into one. Any future chunk encodings with fast access by index can use
the same iterator by simply providing an indexAccessor. Other future
chunk encodings without fast index access (like Gorilla-style) can
still implement the chunkIterator interface as usual.
For one, remove unneeded methods.
Then, instead of using a channel for all values, use a
bufio.Scanner-like interface. This removes the need for creating a
goroutine and avoids the (unnecessary) locking performed by channel
sending and receiving.
This will make it much easier to write new chunk implementations (like
Gorilla-style encoding).
I needed this today for debugging. It can certainly be improved, but
it's already quite helpful.
I refactored the reading of heads.db files out of persistence, which
is an improvement, too.
I made minor changes to the cli package to allow outputting via the
io.Writer interface.
Obviously, it's really bad to depend on timing here. The proper fix
would be to have something like WaitForIndexing for other things to
wait for, too.
For now, let's see if the wait time increase fixes the issue.
This fixes https://github.com/prometheus/prometheus/issues/1059 , but
not in the obvious way (simply not updating the persist watermark,
because that's actually not that simple - we don't really know what
has gone wrong exactly). As any errors relevant here are most likely
caused by severe and unrecoverable problems with the series file,
Using the now quarantine feature is the right step. We don't really
have to be worried about any inconsistent state of the series because
it will be removed for good ASAP. Another plus is that we don't have
to declare the whole storage dirty anymore.
This requires all the panic calls upon unexpected data to be converted
into errors returned. This pollute the function signatures quite
lot. Well, this is Go...
The ideas behind this are the following:
- panic only if it's a programming error. Data corruptions happen, and
they are not programming errors.
- If we detect a data corruption, we "quarantine" the series,
essentially removing it from the database and putting its data into
a separate directory for forensics.
- Failure during writing to a series file is not considered corruption
automatically. It will call setDirty, though, so that a
crashrecovery upon the next restart will commence and check for
that.
- Series quarantining and setDirty calls are logged and counted in
metrics, but are hidden from the user of the interfaces in
interface.go, whith the notable exception of Append(). The reasoning
is that we treat corruption by removing the corrupted series, i.e. a
query for it will return no results on its next call anyway, so
return no results right now. In the case of Append(), we want to
tell the user that no data has been appended, though.
Minor side effects:
- Now consistently using filepath.* instead of path.*.
- Introduced structured logging where I touched it. This makes things
less consistent, but a complete change to structured logging would
be out of scope for this PR.
Fixes https://github.com/prometheus/prometheus/issues/1401
This remove the last (and in fact bogus) use of BoundaryValues.
Thus, a whole lot of unused (and arguably sub-optimal / ugly) code can
be removed here, too.
beorn7