* tsdb: Added ChunkQueryable implementations to db; unified compactor, querier and fanout block iterating.
Chained to https://github.com/prometheus/prometheus/pull/7059
* NewMerge(Chunk)Querier now takies multiple primaries allowing tsdb DB code to use it.
* Added single SeriesEntry / ChunkEntry for all series implementations.
* Unified all vertical, and non vertical for compact and querying to single
merge series / chunk sets by reusing VerticalSeriesMergeFunc for overlapping algorithm (same logic as before)
* Added block (Base/Chunk/)Querier for block querying. We then use populateAndTomb(Base/Chunk/) to iterate over chunks or samples.
* Refactored endpoint tests and querier tests to include subtests.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Addressed comments from Brian and Beorn.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed snapshot test and added chunk iterator support for DBReadOnly.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed race when iterating over Ats first.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed tests.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed populate block tests.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed endpoints test.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed test.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Added test & fixed case of head open chunk.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed DBReadOnly tests and bug producing 1 sample chunks.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Added cases for partial block overlap for multiple full chunks.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Added extra tests for chunk meta after compaction.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed small vertical merge bug and added more tests for that.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Add errors and Warnings to SeriesSet
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Change Querier interface and refactor accordingly
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Refactor promql/engine to propagate warnings at eval stage
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Address review issues
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Make sure all the series from all Selects are pre-advanced
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Address review issues
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Separate merge series sets
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Clean
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Refactor merge querier failure handling
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Refactored and simplified fanout with improvements from incoming chunk iterator PRs.
* Secondary logic is hidden, instead of weird failed series set logic we had.
* Fanout is well commented
* Fanout closing record all errors
* MergeQuerier improved API (clearer)
* deferredGenericMergeSeriesSet is not needed as we return no samples anyway for failed series sets (next = false).
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fix formatting
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Fix CI issues
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Added final tests for error handling.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Addressed Brian's comments.
* Moved hints in populate to be allocated only when needed.
* Used sync.Once in secondary Querier to achieve all-or-nothing partial response logic.
* Select after first Next is done will panic.
NOTE: in lazySeriesSet in theory we could just panic, I think however we can
totally just return error, it will panic in expand anyway.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Utilize errWithWarnings
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Fix recently introduced expansion issue
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Add tests for secondary querier error handling
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Implement lazy merge
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Add name to test cases
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Reorganize
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Address review comments
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Address review comments
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Remove redundant warnings
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Fix rebase mistake
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Callbacks for lifecycle of series in TSDB
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
* Add more comments
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
When appending to the head and a chunk is full it is flushed to the disk and m-mapped (memory mapped) to free up memory
Prom startup now happens in these stages
- Iterate the m-maped chunks from disk and keep a map of series reference to its slice of mmapped chunks.
- Iterate the WAL as usual. Whenever we create a new series, look for it's mmapped chunks in the map created before and add it to that series.
If a head chunk is corrupted the currpted one and all chunks after that are deleted and the data after the corruption is recovered from the existing WAL which means that a corruption in m-mapped files results in NO data loss.
[Mmaped chunks format](https://github.com/prometheus/prometheus/blob/master/tsdb/docs/format/head_chunks.md) - main difference is that the chunk for mmaping now also includes series reference because there is no index for mapping series to chunks.
[The block chunks](https://github.com/prometheus/prometheus/blob/master/tsdb/docs/format/chunks.md) are accessed from the index which includes the offsets for the chunks in the chunks file - example - chunks of series ID have offsets 200, 500 etc in the chunk files.
In case of mmaped chunks, the offsets are stored in memory and accessed from that. During WAL replay, these offsets are restored by iterating all m-mapped chunks as stated above by matching the series id present in the chunk header and offset of that chunk in that file.
**Prombench results**
_WAL Replay_
1h Wal reply time
30% less wal reply time - 4m31 vs 3m36
2h Wal reply time
20% less wal reply time - 8m16 vs 7m
_Memory During WAL Replay_
High Churn:
10-15% less RAM - 32gb vs 28gb
20% less RAM after compaction 34gb vs 27gb
No Churn:
20-30% less RAM - 23gb vs 18gb
40% less RAM after compaction 32.5gb vs 20gb
Screenshots are in [this comment](https://github.com/prometheus/prometheus/pull/6679#issuecomment-621678932)
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
This is technically BREAKING CHANGE, but it was like this from the beginning: I just notice that we rely in
Prometheus on remote read being sorted. This is because we use selected data from remote reads in MergeSeriesSet
which rely on sorting.
I found during work on https://github.com/prometheus/prometheus/pull/5882 that
we do so many repetitions because of this, for not good reason. I think
I found a good balance between convenience and readability with just one method.
Smaller the interface = better.
Also I don't know what TestSelectSorted was testing, but now it's testing sorting.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
This is part of https://github.com/prometheus/prometheus/pull/5882 that can be done to simplify things.
All todos I added will be fixed in follow up PRs.
* querier.Querier, querier.Appender, querier.SeriesSet, and querier.Series interfaces merged
with storage interface.go. All imports that.
* querier.SeriesIterator replaced by chunkenc.Iterator
* Added chunkenc.Iterator.Seek method and tests for xor implementation (?)
* Since we properly handle SelectParams for Select methods I adjusted min max
based on that. This should help in terms of performance for queries with functions like offset.
* added Seek to deletedIterator and test.
* storage/tsdb was removed as it was only a unnecessary glue with incompatible structs.
No logic was changed, only different source of abstractions, so no need for benchmarks.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
Add back Windows CI, we lost it when tsdb was merged into the prometheus
repo. There's many tests failing outside tsdb, so only test tsdb for
now.
Fixes#6513
Signed-off-by: Brian Brazil <brian.brazil@robustperception.io>
Rather than keeping the entire symbol table in memory, keep every nth
offset and walk from there to the entry we need. This ends up slightly
slower, ~360ms per 1M series returned from PostingsForMatchers which is
not much considering the rest of the CPU such a query would go on to
use.
Make LabelValues use the postings tables, rather than having
to do symbol lookups. Use yoloString, as PostingsForMatchers
doesn't need the strings to stick around and adjust the API
call to keep the Querier open until it's all marshalled.
Remove allocatedSymbols memory optimisation, we no longer keep all the
symbol strings in heap memory. Remove LabelValuesFor and LabelIndices,
they're dead code. Ensure we've still tests for label indices,
and add missing test that we can work with old V1 Format index files.
PostingForMatchers performance is slightly better, with a big drop in
allocation counts due to using yoloString for LabelValues:
benchmark old ns/op new ns/op delta
BenchmarkPostingsForMatchers/Block/n="1"-4 36698 36681 -0.05%
BenchmarkPostingsForMatchers/Block/n="1",j="foo"-4 522786 560887 +7.29%
BenchmarkPostingsForMatchers/Block/j="foo",n="1"-4 511652 537680 +5.09%
BenchmarkPostingsForMatchers/Block/n="1",j!="foo"-4 522102 564239 +8.07%
BenchmarkPostingsForMatchers/Block/i=~".*"-4 113689911 111795919 -1.67%
BenchmarkPostingsForMatchers/Block/i=~".+"-4 135825572 132871085 -2.18%
BenchmarkPostingsForMatchers/Block/i=~""-4 40782628 38038181 -6.73%
BenchmarkPostingsForMatchers/Block/i!=""-4 31267869 29194327 -6.63%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",j="foo"-4 112733329 111568823 -1.03%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",i!="2",j="foo"-4 112868153 111232029 -1.45%
BenchmarkPostingsForMatchers/Block/n="1",i!=""-4 31338257 29349446 -6.35%
BenchmarkPostingsForMatchers/Block/n="1",i!="",j="foo"-4 32054482 29972436 -6.50%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",j="foo"-4 136504654 133968442 -1.86%
BenchmarkPostingsForMatchers/Block/n="1",i=~"1.+",j="foo"-4 27960350 27264997 -2.49%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!="2",j="foo"-4 136765564 133860724 -2.12%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!~"2.*",j="foo"-4 163714583 159453668 -2.60%
benchmark old allocs new allocs delta
BenchmarkPostingsForMatchers/Block/n="1"-4 6 6 +0.00%
BenchmarkPostingsForMatchers/Block/n="1",j="foo"-4 11 11 +0.00%
BenchmarkPostingsForMatchers/Block/j="foo",n="1"-4 11 11 +0.00%
BenchmarkPostingsForMatchers/Block/n="1",j!="foo"-4 17 15 -11.76%
BenchmarkPostingsForMatchers/Block/i=~".*"-4 100012 12 -99.99%
BenchmarkPostingsForMatchers/Block/i=~".+"-4 200040 100040 -49.99%
BenchmarkPostingsForMatchers/Block/i=~""-4 200045 100045 -49.99%
BenchmarkPostingsForMatchers/Block/i!=""-4 200041 100041 -49.99%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",j="foo"-4 100017 17 -99.98%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",i!="2",j="foo"-4 100023 23 -99.98%
BenchmarkPostingsForMatchers/Block/n="1",i!=""-4 200046 100046 -49.99%
BenchmarkPostingsForMatchers/Block/n="1",i!="",j="foo"-4 200050 100050 -49.99%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",j="foo"-4 200049 100049 -49.99%
BenchmarkPostingsForMatchers/Block/n="1",i=~"1.+",j="foo"-4 111150 11150 -89.97%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!="2",j="foo"-4 200055 100055 -49.99%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!~"2.*",j="foo"-4 311238 111238 -64.26%
benchmark old bytes new bytes delta
BenchmarkPostingsForMatchers/Block/n="1"-4 296 296 +0.00%
BenchmarkPostingsForMatchers/Block/n="1",j="foo"-4 424 424 +0.00%
BenchmarkPostingsForMatchers/Block/j="foo",n="1"-4 424 424 +0.00%
BenchmarkPostingsForMatchers/Block/n="1",j!="foo"-4 552 1544 +179.71%
BenchmarkPostingsForMatchers/Block/i=~".*"-4 1600482 1606125 +0.35%
BenchmarkPostingsForMatchers/Block/i=~".+"-4 17259065 17264709 +0.03%
BenchmarkPostingsForMatchers/Block/i=~""-4 17259150 17264780 +0.03%
BenchmarkPostingsForMatchers/Block/i!=""-4 17259048 17264680 +0.03%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",j="foo"-4 1600610 1606242 +0.35%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",i!="2",j="foo"-4 1600813 1606434 +0.35%
BenchmarkPostingsForMatchers/Block/n="1",i!=""-4 17259176 17264808 +0.03%
BenchmarkPostingsForMatchers/Block/n="1",i!="",j="foo"-4 17259304 17264936 +0.03%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",j="foo"-4 17259333 17264965 +0.03%
BenchmarkPostingsForMatchers/Block/n="1",i=~"1.+",j="foo"-4 3142628 3148262 +0.18%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!="2",j="foo"-4 17259509 17265141 +0.03%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!~"2.*",j="foo"-4 20405680 20416944 +0.06%
However overall Select performance is down and involves more allocs, due to
having to do more than a simple map lookup to resolve a symbol and that all the strings
returned are allocated:
benchmark old ns/op new ns/op delta
BenchmarkQuerierSelect/Block/1of1000000-4 506092636 862678244 +70.46%
BenchmarkQuerierSelect/Block/10of1000000-4 505638968 860917636 +70.26%
BenchmarkQuerierSelect/Block/100of1000000-4 505229450 882150048 +74.60%
BenchmarkQuerierSelect/Block/1000of1000000-4 515905414 862241115 +67.13%
BenchmarkQuerierSelect/Block/10000of1000000-4 516785354 874841110 +69.29%
BenchmarkQuerierSelect/Block/100000of1000000-4 540742808 907030187 +67.74%
BenchmarkQuerierSelect/Block/1000000of1000000-4 815224288 1181236903 +44.90%
benchmark old allocs new allocs delta
BenchmarkQuerierSelect/Block/1of1000000-4 4000020 6000020 +50.00%
BenchmarkQuerierSelect/Block/10of1000000-4 4000038 6000038 +50.00%
BenchmarkQuerierSelect/Block/100of1000000-4 4000218 6000218 +50.00%
BenchmarkQuerierSelect/Block/1000of1000000-4 4002018 6002018 +49.97%
BenchmarkQuerierSelect/Block/10000of1000000-4 4020018 6020018 +49.75%
BenchmarkQuerierSelect/Block/100000of1000000-4 4200018 6200018 +47.62%
BenchmarkQuerierSelect/Block/1000000of1000000-4 6000018 8000019 +33.33%
benchmark old bytes new bytes delta
BenchmarkQuerierSelect/Block/1of1000000-4 176001468 227201476 +29.09%
BenchmarkQuerierSelect/Block/10of1000000-4 176002620 227202628 +29.09%
BenchmarkQuerierSelect/Block/100of1000000-4 176014140 227214148 +29.09%
BenchmarkQuerierSelect/Block/1000of1000000-4 176129340 227329348 +29.07%
BenchmarkQuerierSelect/Block/10000of1000000-4 177281340 228481348 +28.88%
BenchmarkQuerierSelect/Block/100000of1000000-4 188801340 240001348 +27.12%
BenchmarkQuerierSelect/Block/1000000of1000000-4 304001340 355201616 +16.84%
Signed-off-by: Brian Brazil <brian.brazil@robustperception.io>
* Fix tsdb panic when querying corrupted chunks.
check that the chunk segment has enough data to read all chunk pieces.
* refactor, simplify and add tests.
* simpfiy WriteChunks implementation
Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>
Bartlomiej Plotka