Commit Graph

33 Commits (0e12f11d6112585415140bcdf0fd30c42e4255fe)

Author SHA1 Message Date
beorn7 c9fd3c235d Merge branch 'main' into sparsehistogram 2022-08-10 17:54:37 +02:00
Paschalis Tsilias a0f7c31c26
Fix type byte of WAL metadata records in docs (#11035)
Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>
2022-07-19 18:22:02 +05:30
Paschalis Tsilias d1122e0743
Introduce TSDB changes for appending metadata to the WAL (#10972)
* Append metadata to the WAL

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Remove extra whitespace; Reword some docstrings and comments

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Use RLock() for hasNewMetadata check

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Use single byte for metric type in RefMetadata

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Update proposed WAL format for single-byte type metadata

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Implementa MetadataAppender interface for the Agent

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Address first round of review comments

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Amend description of metadata in wal.md

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Correct key used to retrieve metadata from cache

When we're setting metadata entries in the scrapeCace, we're using the
p.Help(), p.Unit(), p.Type() helpers, which retrieve the series name and
use it as the cache key. When checking for cache entries though, we used
p.Series() as the key, which included the metric name _with_ its labels.
That meant that we were never actually hitting the cache. We're fixing
this by utiling the __name__ internal label for correctly getting the
cache entries after they've been set by setHelp(), setType() or
setUnit().

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Put feature behind a feature flag

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Fix AppendMetadata docstring

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Reorder WAL format document

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Change error message of AppendMetadata; Fix access of s.meta in AppendMetadata

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Reuse temporary buffer in Metadata encoder

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Only keep latest metadata for each refID during checkpointing

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Fix test that's referencing decoding metadata

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Avoid creating metadata block if no new metadata are present

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Add tests for corrupt metadata block and relevant record type

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Fix CR comments

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Extract logic about changing metadata in an anonymous function

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Implement new proposed WAL format and amend relevant tests

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Use 'const' for metadata field names

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Apply metadata to head memSeries in Commit, not in AppendMetadata

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Add docstring and rename extracted helper in scrape.go

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Add tests for tsdb-related cases

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Fix linter issues vol1

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Fix linter issues vol2

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Fix Windows test by closing WAL reader files

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Use switch instead of two if statements in metadata decoding

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Fix review comments around TestMetadata* tests

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Add code for replaying WAL; test correctness of in-memory data after a replay

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Remove scrape-loop related code from PR

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Address first round of comments

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Simplify tests by sorting slices before comparison

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Fix test to use separate transactions

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Empty out buffer and record slices after encoding latest metadata

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Fix linting issue

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Update calculation for DroppedMetadata metric

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Rename MetadataAppender interface and AppendMetadata method to MetadataUpdater/UpdateMetadata

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Reuse buffer when encoding latest metadata for each series

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Fix review comments; Check all returned error values using two helpers

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Simplify use of helpers

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>

* Satisfy linter

Signed-off-by: Paschalis Tsilias <paschalist0@gmail.com>
2022-07-19 10:58:52 +02:00
ZhangJian He 95b7d058ac
Fix markdown syntax in tsdb index.md (#11032)
* Fix markdown syntax in tsdb index.md

Signed-off-by: ZhangJian He <shoothzj@gmail.com>

* Update tsdb/docs/format/index.md

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

Signed-off-by: ZhangJian He <shoothzj@gmail.com>
2022-07-18 04:28:52 -07:00
beorn7 40ad5e284a Merge branch 'main' into beorn7/sparsehistogram 2022-06-09 20:50:30 +02:00
David Leadbeater 57f4aab27d
Update godoc links and remove note about TSDB versioning (#10754)
Signed-off-by: David Leadbeater <dgl@dgl.cx>
2022-05-26 18:34:43 +10:00
beorn7 4210aac74a Merge branch 'main' into sparsehistogram 2022-03-22 14:47:42 +01:00
songjiayang 8d8be43824
Update wal.md (#10442)
update exemplar record type

Signed-off-by: songjiayang <songjiayang1@gmail.com>
2022-03-15 22:33:45 +05:30
beorn7 5d4db805ac Merge branch 'main' into sparsehistogram 2021-11-17 19:57:31 +01:00
Dieter Plaetinck 067efc3725
clarify HeadChunkID type and usage (#9726)
Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
2021-11-17 18:35:10 +05:30
Dieter Plaetinck 0fac9bb859
Add basic initial developer docs for TSDB (#9451)
* Add basic initial developer docs for TSDB

There's a decent amount of content already out there (blog posts,
conference talks, etc), but:
* when they get stale, they don't tend to get updated
* they still leave me with questions that I'ld like to answer
  for developers (like me) who want to use, or work with, TSDB

What I propose is developer docs inside the prometheus
repository.  Easy to find and harness the power of the community
to expand it and keep it up to date.

* perfect is the enemy of good.  Let's have a base and incrementally improve
* Markdown docs should be broad but not too deep.  Source code comments
  can complement them, and are the ideal place for implementation details.

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* use example code that works out of the box

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Apply suggestions from code review

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* PR feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* more docs

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* PR feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Apply suggestions from code review

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Apply suggestions from code review

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

* feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Update tsdb/docs/usage.md

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

* final tweaks

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* workaround docs versioning issue

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Move example code to real executable, testable example.

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* cleanup example test and make sure it always reproduces

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* obtain temp dir in a way that works with older Go versions

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Fix Ganesh's comments

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
2021-11-17 15:51:27 +05:30
Dieter Plaetinck cda025b5b5
TSDB: demistify SeriesRefs and ChunkRefs (#9536)
* TSDB: demistify seriesRefs and ChunkRefs

The TSDB package contains many types of series and chunk references,
all shrouded in uint types.  Often the same uint value may
actually mean one of different types, in non-obvious ways.

This PR aims to clarify the code and help navigating to relevant docs,
usage, etc much quicker.

Concretely:

* Use appropriately named types and document their semantics and
  relations.
* Make multiplexing and demuxing of types explicit
  (on the boundaries between concrete implementations and generic
  interfaces).
* Casting between different types should be free.  None of the changes
  should have any impact on how the code runs.

TODO: Implement BlockSeriesRef where appropriate (for a future PR)

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* agent: demistify seriesRefs and ChunkRefs

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
2021-11-06 15:40:04 +05:30
Dieter Plaetinck d5bfbe3114
improve bstream comments and doc (#9560)
* improve bstream comments and doc

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
2021-10-25 18:44:15 +05:30
beorn7 1a4e54cfbb tsdb: Complete chunk format documentation
This also tweaks and fixes a few things done previously.

Signed-off-by: beorn7 <beorn@grafana.com>
2021-10-19 13:51:30 +02:00
beorn7 ad9b4c2b68 Fix typos
Signed-off-by: beorn7 <beorn@grafana.com>
2021-10-18 15:44:13 +02:00
beorn7 fe50d6fc14 Update chunk layout documentation
Signed-off-by: beorn7 <beorn@grafana.com>
2021-10-15 23:18:41 +02:00
beorn7 7a8bb8222c Style cleanup of all the changes in sparsehistogram so far
A lot of this code was hacked together, literally during a
hackathon. This commit intends not to change the code substantially,
but just make the code obey the usual style practices.

A (possibly incomplete) list of areas:

* Generally address linter warnings.

* The `pgk` directory is deprecated as per dev-summit. No new packages should
  be added to it. I moved the new `pkg/histogram` package to `model`
  anticipating what's proposed in #9478.

* Make the naming of the Sparse Histogram more consistent. Including
  abbreviations, there were just too many names for it: SparseHistogram,
  Histogram, Histo, hist, his, shs, h. The idea is to call it "Histogram" in
  general. Only add "Sparse" if it is needed to avoid confusion with
  conventional Histograms (which is rare because the TSDB really has no notion
  of conventional Histograms). Use abbreviations only in local scope, and then
  really abbreviate (not just removing three out of seven letters like in
  "Histo"). This is in the spirit of
  https://github.com/golang/go/wiki/CodeReviewComments#variable-names

* Several other minor name changes.

* A lot of formatting of doc comments. For one, following
  https://github.com/golang/go/wiki/CodeReviewComments#comment-sentences
  , but also layout question, anticipating how things will look like
  when rendered by `godoc` (even where `godoc` doesn't render them
  right now because they are for unexported types or not a doc comment
  at all but just a normal code comment - consistency is queen!).

* Re-enabled `TestQueryLog` and `TestEndopints` (they pass now,
  leaving them disabled was presumably an oversight).

* Bucket iterator for histogram.Histogram is now created with a
  method.

* HistogramChunk.iterator now allows iterator recycling. (I think
  @dieterbe only commented it out because he was confused by the
  question in the comment.)

* HistogramAppender.Append panics now because we decided to treat
  staleness marker differently.

Signed-off-by: beorn7 <beorn@grafana.com>
2021-10-11 13:02:03 +02:00
beorn7 fd5ea4e0b5 Merge branch 'main' into sparsehistogram 2021-10-07 23:16:42 +02:00
Ganesh Vernekar 35b1a82594
Exemplars in snapshot (#9255)
* Exemplars in snapshot

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix lint

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Add docs

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix lint

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix comments

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
2021-08-30 19:34:38 +05:30
Ganesh Vernekar 095f572d4a
Sync sparsehistogram branch with main (#9189)
* Fix `kuma_sd` targetgroup reporting (#9157)

* Bundle all xDS targets into a single group

Signed-off-by: austin ce <austin.cawley@gmail.com>

* Snapshot in-memory chunks on shutdown for faster restarts (#7229)

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Rename links

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Remove Individual Data Type Caps in Per-shard Buffering for Remote Write (#8921)

* Moved everything to nPending buffer

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Simplify exemplar capacity addition

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Added pre-allocation

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Don't allocate if not sending exemplars

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Avoid deadlock when processing duplicate series record (#9170)

* Avoid deadlock when processing duplicate series record

`processWALSamples()` needs to be able to send on its output channel
before it can read the input channel, so reads to allow this in case the
output channel is full.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* processWALSamples: update comment

Previous text seems to relate to an earlier implementation.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* Optimise WAL loading by removing extra map and caching min-time (#9160)

* BenchmarkLoadWAL: close WAL after use

So that goroutines are stopped and resources released

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* BenchmarkLoadWAL: make series IDs co-prime with #workers

Series are distributed across workers by taking the modulus of the
ID with the number of workers, so multiples of 100 are a poor choice.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* BenchmarkLoadWAL: simulate mmapped chunks

Real Prometheus cuts chunks every 120 samples, then skips those samples
when re-reading the WAL. Simulate this by creating a single mapped chunk
for each series, since the max time is all the reader looks at.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* Fix comment

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* Remove series map from processWALSamples()

The locks that is commented to reduce contention in are now sharded
32,000 ways, so won't be contended. Removing the map saves memory and
goes just as fast.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* loadWAL: Cache the last mmapped chunk time

So we can skip calling append() for samples it will reject.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* Improvements from code review

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* Full stops and capitals on comments

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* Cache max time in both places mmappedChunks is updated

Including refactor to extract function `setMMappedChunks`, to reduce
code duplication.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* Update head min/max time when mmapped chunks added

This ensures we have the correct values if no WAL samples are added for
that series.

Note that `mSeries.maxTime()` was always `math.MinInt64` before, since
that function doesn't consider mmapped chunks.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* Split Go and React Tests (#8897)

* Added go-ci and react-ci

Co-authored-by: Julien Pivotto <roidelapluie@inuits.eu>
Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Remove search keymap from new expression editor (#9184)

Signed-off-by: Julius Volz <julius.volz@gmail.com>

Co-authored-by: Austin Cawley-Edwards <austin.cawley@gmail.com>
Co-authored-by: Levi Harrison <git@leviharrison.dev>
Co-authored-by: Julien Pivotto <roidelapluie@inuits.eu>
Co-authored-by: Bryan Boreham <bjboreham@gmail.com>
Co-authored-by: Julius Volz <julius.volz@gmail.com>
2021-08-11 15:43:17 +05:30
Ganesh Vernekar ee7e0071d1
Snapshot in-memory chunks on shutdown for faster restarts (#7229)
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
2021-08-06 17:51:01 +01:00
Dieter Plaetinck 4d27816ea5
Sparsehistogram: improve dod encoding, testing, encode chunk metadata (#9015)
* factor out different varbit schemes and include Beorn's "optimum" for buckets

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* use more compact dod encoding scheme for SHS chunk columns

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* remove FB VB and xor dod encoding because we won't use it

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* HistoChunk metadata encoding

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* add SparseHistogram.Copy()

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* histogram test: test appending a few histograms

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* add license headers

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
2021-06-30 16:15:43 +05:30
Callum Styan 8fd73b1d28
Add Exemplar Remote Write support (#8296)
* Write exemplars to the WAL and send them over remote write.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Update example for exemplars, print data in a more obvious format.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Add metrics for remote write of exemplars.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Fix incorrect slices passed to send in remote write.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* We need to unregister the new metrics.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Address review comments

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Order of exemplar append vs write exemplar to WAL needs to change.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Several fixes to prevent sending uninitialized or incorrect samples with an exemplar. Fix dropping exemplar for missing series. Add tests for queue_manager sending exemplars

Signed-off-by: Martin Disibio <mdisibio@gmail.com>

* Store both samples and exemplars in the same timeseries buffer to remove the alloc when building final request, keep sub-slices in separate buffers for re-use

Signed-off-by: Martin Disibio <mdisibio@gmail.com>

* Condense sample/exemplar delivery tests to parameterized sub-tests

Signed-off-by: Martin Disibio <mdisibio@gmail.com>

* Rename test methods for clarity now that they also handle exemplars

Signed-off-by: Martin Disibio <mdisibio@gmail.com>

* Rename counter variable. Fix instances where metrics were not updated correctly

Signed-off-by: Martin Disibio <mdisibio@gmail.com>

* Add exemplars to LoadWAL benchmark

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* last exemplars timestamp metric needs to convert value to seconds with
ms precision

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Process exemplar records in a separate go routine when loading the WAL.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Address review comments related to clarifying comments and variable
names. Also refactor sample/exemplar to enqueue prompb types.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Regenerate types proto with comments, update protoc version again.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Put remote write of exemplars behind a feature flag.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Address some of Ganesh's review comments.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Move exemplar remote write feature flag to a config file field.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Address Bartek's review comments.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Don't allocate exemplar buffers in queue_manager if we're not going to
send exemplars over remote write.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Add ValidateExemplar function, validate exemplars when appending to head
and log them all to WAL before adding them to exemplar storage.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Address more reivew comments from Ganesh.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Add exemplar total label length check.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Address a few last review comments

Signed-off-by: Callum Styan <callumstyan@gmail.com>

Co-authored-by: Martin Disibio <mdisibio@gmail.com>
2021-05-06 13:53:52 -07:00
Ganesh Vernekar 5de7d15879
Consistent naming and better names for fields in TSDB format docs (#8077)
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-10-19 14:27:19 +05:30
Ganesh Vernekar 50ae4e298b
Fix magic number in docs (#7998)
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-10-01 15:05:01 +05:30
Simon Pasquier d634785944
tsdb/docs: fix head chunks directory + link from README (#7309)
Signed-off-by: Simon Pasquier <spasquie@redhat.com>
2020-06-17 20:38:21 +05:30
Ganesh Vernekar d4b9fe801f
M-map full chunks of Head from disk (#6679)
When appending to the head and a chunk is full it is flushed to the disk and m-mapped (memory mapped) to free up memory

Prom startup now happens in these stages
 - Iterate the m-maped chunks from disk and keep a map of series reference to its slice of mmapped chunks.
- Iterate the WAL as usual. Whenever we create a new series, look for it's mmapped chunks in the map created before and add it to that series.

If a head chunk is corrupted the currpted one and all chunks after that are deleted and the data after the corruption is recovered from the existing WAL which means that a corruption in m-mapped files results in NO data loss.

[Mmaped chunks format](https://github.com/prometheus/prometheus/blob/master/tsdb/docs/format/head_chunks.md)  - main difference is that the chunk for mmaping now also includes series reference because there is no index for mapping series to chunks.
[The block chunks](https://github.com/prometheus/prometheus/blob/master/tsdb/docs/format/chunks.md) are accessed from the index which includes the offsets for the chunks in the chunks file - example - chunks of series ID have offsets 200, 500 etc in the chunk files.
In case of mmaped chunks, the offsets are stored in memory and accessed from that. During WAL replay, these offsets are restored by iterating all m-mapped chunks as stated above by matching the series id present in the chunk header and offset of that chunk in that file.

**Prombench results**

_WAL Replay_

1h Wal reply time
30% less wal reply time - 4m31 vs 3m36
2h Wal reply time
20% less wal reply time - 8m16 vs 7m

_Memory During WAL Replay_

High Churn:
10-15% less RAM -  32gb vs 28gb
20% less RAM after compaction 34gb vs 27gb
No Churn:
20-30% less RAM -  23gb vs 18gb
40% less RAM after compaction 32.5gb vs 20gb

Screenshots are in [this comment](https://github.com/prometheus/prometheus/pull/6679#issuecomment-621678932)


Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-05-06 21:00:00 +05:30
Ganesh Vernekar e50fdbc70c
Live m-mapping of chunks on disk (#6830)
* Live m-mapping of chunks on disk

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comments

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comments Part 2

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comments Part 3

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comments Part 4

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Attempt to fix windows bug

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-03-19 22:03:44 +05:30
Brian Brazil d782387f81
Stream symbols during compaction. (#6468)
Rather than buffer up symbols in RAM, do it one by one
during compaction. Then use the reader's symbol handling
for symbol lookups during the rest of the index write.

There is some slowdown in compaction, due to having to look through a file
rather than a hash lookup. This is noise to the overall cost of compacting
series with thousands of samples though.

benchmark                                                                                   old ns/op       new ns/op       delta
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=101-4        539917175       675341565       +25.08%
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=1001-4       2441815993      2477453524      +1.46%
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=2001-4       3978543559      3922909687      -1.40%
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=5001-4       8430219716      8586610007      +1.86%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=101-4      1786424591      1909552782      +6.89%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=1001-4     5328998202      6020839950      +12.98%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=2001-4     10085059958     11085278690     +9.92%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=5001-4     25497010155     27018079806     +5.97%
BenchmarkCompactionFromHead/labelnames=1,labelvalues=100000-4                               2427391406      2817217987      +16.06%
BenchmarkCompactionFromHead/labelnames=10,labelvalues=10000-4                               2592965497      2538805050      -2.09%
BenchmarkCompactionFromHead/labelnames=100,labelvalues=1000-4                               2437388343      2668012858      +9.46%
BenchmarkCompactionFromHead/labelnames=1000,labelvalues=100-4                               2317095324      2787423966      +20.30%
BenchmarkCompactionFromHead/labelnames=10000,labelvalues=10-4                               2600239857      2096973860      -19.35%

benchmark                                                                                   old allocs     new allocs     delta
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=101-4        500851         470794         -6.00%
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=1001-4       821527         791451         -3.66%
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=2001-4       1141562        1111508        -2.63%
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=5001-4       2141576        2111504        -1.40%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=101-4      871466         841424         -3.45%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=1001-4     1941428        1911415        -1.55%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=2001-4     3071573        3041510        -0.98%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=5001-4     6771648        6741509        -0.45%
BenchmarkCompactionFromHead/labelnames=1,labelvalues=100000-4                               731493         824888         +12.77%
BenchmarkCompactionFromHead/labelnames=10,labelvalues=10000-4                               793918         887311         +11.76%
BenchmarkCompactionFromHead/labelnames=100,labelvalues=1000-4                               811842         905204         +11.50%
BenchmarkCompactionFromHead/labelnames=1000,labelvalues=100-4                               832244         925081         +11.16%
BenchmarkCompactionFromHead/labelnames=10000,labelvalues=10-4                               921553         1019162        +10.59%

benchmark                                                                                   old bytes      new bytes      delta
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=101-4        40532648       35698276       -11.93%
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=1001-4       60340216       53409568       -11.49%
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=2001-4       81087336       72065552       -11.13%
BenchmarkCompaction/type=normal,blocks=4,series=10000,samplesPerSeriesPerBlock=5001-4       142485576      120878544      -15.16%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=101-4      208661368      203831136      -2.31%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=1001-4     347345904      340484696      -1.98%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=2001-4     585185856      576244648      -1.53%
BenchmarkCompaction/type=vertical,blocks=4,series=10000,samplesPerSeriesPerBlock=5001-4     1357641792     1358966528     +0.10%
BenchmarkCompactionFromHead/labelnames=1,labelvalues=100000-4                               126486664      119666744      -5.39%
BenchmarkCompactionFromHead/labelnames=10,labelvalues=10000-4                               122323192      115117224      -5.89%
BenchmarkCompactionFromHead/labelnames=100,labelvalues=1000-4                               126404504      119469864      -5.49%
BenchmarkCompactionFromHead/labelnames=1000,labelvalues=100-4                               119047832      112230408      -5.73%
BenchmarkCompactionFromHead/labelnames=10000,labelvalues=10-4                               136576016      116634800      -14.60%

Signed-off-by: Brian Brazil <brian.brazil@robustperception.io>
2019-12-17 19:49:54 +00:00
Brian Brazil 48d25e6fe7 Reduce memory used by postings offset table.
Rather than keeping the offset of each postings list, instead
keep the nth offset of the offset of the posting list. As postings
list offsets have always been sorted, we can then get to the closest
entry before the one we want an iterate forwards.

I haven't done much tuning on the 32 number, it was chosen to try
not to read through more than a 4k page of data.

Switch to a bulk interface for fetching postings. Use it to avoid having
to re-read parts of the posting offset table when querying lots of it.

For a index with what BenchmarkHeadPostingForMatchers uses RAM
for r.postings drops from 3.79MB to 80.19kB or about 48x.
Bytes allocated go down by 30%, and suprisingly CPU usage drops by
4-6% for typical queries too.

benchmark                                                               old ns/op      new ns/op      delta
BenchmarkPostingsForMatchers/Block/n="1"-4                              35231          36673          +4.09%
BenchmarkPostingsForMatchers/Block/n="1",j="foo"-4                      563380         540627         -4.04%
BenchmarkPostingsForMatchers/Block/j="foo",n="1"-4                      536782         534186         -0.48%
BenchmarkPostingsForMatchers/Block/n="1",j!="foo"-4                     533990         541550         +1.42%
BenchmarkPostingsForMatchers/Block/i=~".*"-4                            113374598      117969608      +4.05%
BenchmarkPostingsForMatchers/Block/i=~".+"-4                            146329884      139651442      -4.56%
BenchmarkPostingsForMatchers/Block/i=~""-4                              50346510       44961127       -10.70%
BenchmarkPostingsForMatchers/Block/i!=""-4                              41261550       35356165       -14.31%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",j="foo"-4              112544418      116904010      +3.87%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",i!="2",j="foo"-4       112487086      116864918      +3.89%
BenchmarkPostingsForMatchers/Block/n="1",i!=""-4                        41094758       35457904       -13.72%
BenchmarkPostingsForMatchers/Block/n="1",i!="",j="foo"-4                41906372       36151473       -13.73%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",j="foo"-4              147262414      140424800      -4.64%
BenchmarkPostingsForMatchers/Block/n="1",i=~"1.+",j="foo"-4             28615629       27872072       -2.60%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!="2",j="foo"-4       147117177      140462403      -4.52%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!~"2.*",j="foo"-4     175096826      167902298      -4.11%

benchmark                                                               old allocs     new allocs     delta
BenchmarkPostingsForMatchers/Block/n="1"-4                              4              6              +50.00%
BenchmarkPostingsForMatchers/Block/n="1",j="foo"-4                      7              11             +57.14%
BenchmarkPostingsForMatchers/Block/j="foo",n="1"-4                      7              11             +57.14%
BenchmarkPostingsForMatchers/Block/n="1",j!="foo"-4                     15             17             +13.33%
BenchmarkPostingsForMatchers/Block/i=~".*"-4                            100010         100012         +0.00%
BenchmarkPostingsForMatchers/Block/i=~".+"-4                            200069         200040         -0.01%
BenchmarkPostingsForMatchers/Block/i=~""-4                              200072         200045         -0.01%
BenchmarkPostingsForMatchers/Block/i!=""-4                              200070         200041         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",j="foo"-4              100013         100017         +0.00%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",i!="2",j="foo"-4       100017         100023         +0.01%
BenchmarkPostingsForMatchers/Block/n="1",i!=""-4                        200073         200046         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i!="",j="foo"-4                200075         200050         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",j="foo"-4              200074         200049         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i=~"1.+",j="foo"-4             111165         111150         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!="2",j="foo"-4       200078         200055         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!~"2.*",j="foo"-4     311282         311238         -0.01%

benchmark                                                               old bytes     new bytes     delta
BenchmarkPostingsForMatchers/Block/n="1"-4                              264           296           +12.12%
BenchmarkPostingsForMatchers/Block/n="1",j="foo"-4                      360           424           +17.78%
BenchmarkPostingsForMatchers/Block/j="foo",n="1"-4                      360           424           +17.78%
BenchmarkPostingsForMatchers/Block/n="1",j!="foo"-4                     520           552           +6.15%
BenchmarkPostingsForMatchers/Block/i=~".*"-4                            1600461       1600482       +0.00%
BenchmarkPostingsForMatchers/Block/i=~".+"-4                            24900801      17259077      -30.69%
BenchmarkPostingsForMatchers/Block/i=~""-4                              24900836      17259151      -30.69%
BenchmarkPostingsForMatchers/Block/i!=""-4                              24900760      17259048      -30.69%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",j="foo"-4              1600557       1600621       +0.00%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",i!="2",j="foo"-4       1600717       1600813       +0.01%
BenchmarkPostingsForMatchers/Block/n="1",i!=""-4                        24900856      17259176      -30.69%
BenchmarkPostingsForMatchers/Block/n="1",i!="",j="foo"-4                24900952      17259304      -30.69%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",j="foo"-4              24900993      17259333      -30.69%
BenchmarkPostingsForMatchers/Block/n="1",i=~"1.+",j="foo"-4             3788311       3142630       -17.04%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!="2",j="foo"-4       24901137      17259509      -30.69%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!~"2.*",j="foo"-4     28693086      20405680      -28.88%

Signed-off-by: Brian Brazil <brian.brazil@robustperception.io>
2019-12-11 19:59:31 +00:00
yuxiaobo 7850f1b35c new world spelling mistake
Signed-off-by: yuxiaobo <yuxiaobogo@163.com>
2019-10-17 19:09:54 +08:00
zhulongcheng e081406b5b tsdb: update chunks format (#6033)
Signed-off-by: zhulongcheng <zhulongcheng.dev@gmail.com>
2019-09-19 13:56:32 +03:00
Ganesh Vernekar 7cf09b0395
Moving tsdb into its own subdirectory
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2019-08-13 13:58:49 +05:30