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prometheus/storage/series.go

220 lines
5.4 KiB

storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
// Copyright 2020 The Prometheus Authors
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.
package storage
import (
"math"
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
"sort"
"github.com/prometheus/prometheus/pkg/labels"
"github.com/prometheus/prometheus/tsdb/chunkenc"
"github.com/prometheus/prometheus/tsdb/chunks"
"github.com/prometheus/prometheus/tsdb/tsdbutil"
)
type listSeriesIterator struct {
samples Samples
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
idx int
}
type samples []tsdbutil.Sample
func (s samples) Get(i int) tsdbutil.Sample { return s[i] }
func (s samples) Len() int { return len(s) }
// Samples interface allows to work on arrays of types that are compatible with tsdbutil.Sample.
type Samples interface {
Get(i int) tsdbutil.Sample
Len() int
}
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
// NewListSeriesIterator returns listSeriesIterator that allows to iterate over provided samples. Does not handle overlaps.
func NewListSeriesIterator(samples Samples) chunkenc.Iterator {
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
return &listSeriesIterator{samples: samples, idx: -1}
}
func (it *listSeriesIterator) At() (int64, float64) {
s := it.samples.Get(it.idx)
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
return s.T(), s.V()
}
func (it *listSeriesIterator) Next() bool {
it.idx++
return it.idx < it.samples.Len()
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
}
func (it *listSeriesIterator) Seek(t int64) bool {
if it.idx == -1 {
it.idx = 0
}
// Do binary search between current position and end.
it.idx = sort.Search(it.samples.Len()-it.idx, func(i int) bool {
s := it.samples.Get(i + it.idx)
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
return s.T() >= t
})
return it.idx < it.samples.Len()
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
}
func (it *listSeriesIterator) Err() error { return nil }
type listChunkSeriesIterator struct {
chks []chunks.Meta
idx int
}
// NewListChunkSeriesIterator returns listChunkSeriesIterator that allows to iterate over provided chunks. Does not handle overlaps.
func NewListChunkSeriesIterator(chks ...chunks.Meta) chunks.Iterator {
return &listChunkSeriesIterator{chks: chks, idx: -1}
}
func (it *listChunkSeriesIterator) At() chunks.Meta {
return it.chks[it.idx]
}
func (it *listChunkSeriesIterator) Next() bool {
it.idx++
return it.idx < len(it.chks)
}
func (it *listChunkSeriesIterator) Err() error { return nil }
type chunkSetToSeriesSet struct {
ChunkSeriesSet
chkIterErr error
sameSeriesChunks []Series
}
// NewSeriesSetFromChunkSeriesSet converts ChunkSeriesSet to SeriesSet by decoding chunks one by one.
func NewSeriesSetFromChunkSeriesSet(chk ChunkSeriesSet) SeriesSet {
return &chunkSetToSeriesSet{ChunkSeriesSet: chk}
}
func (c *chunkSetToSeriesSet) Next() bool {
if c.Err() != nil || !c.ChunkSeriesSet.Next() {
return false
}
iter := c.ChunkSeriesSet.At().Iterator()
c.sameSeriesChunks = c.sameSeriesChunks[:0]
for iter.Next() {
c.sameSeriesChunks = append(c.sameSeriesChunks, &chunkToSeriesDecoder{
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
labels: c.ChunkSeriesSet.At().Labels(),
Meta: iter.At(),
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
})
}
if iter.Err() != nil {
c.chkIterErr = iter.Err()
return false
}
return true
}
func (c *chunkSetToSeriesSet) At() Series {
// Series composed of same chunks for the same series.
return ChainedSeriesMerge(c.sameSeriesChunks...)
}
func (c *chunkSetToSeriesSet) Err() error {
if c.chkIterErr != nil {
return c.chkIterErr
}
return c.ChunkSeriesSet.Err()
}
type chunkToSeriesDecoder struct {
chunks.Meta
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005) * storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. ## Rationales: In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples. This means that we unnecessary decode/encode, wasting CPU, time and memory. This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers. All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos). ## Changes * Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that Storage will implement both chunked and samples. * Added Seek to chunks.Iterator interface for iterating over chunks. * NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added. * Improved tests. * Added some TODO for further simplifications in next PRs. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Brian's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Moved s/Labeled/SeriesLabels as per Krasi suggestion. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Addressed Krasi's comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Second iteration of Krasi comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com> * Another round of comments. Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
5 years ago
labels labels.Labels
}
func (s *chunkToSeriesDecoder) Labels() labels.Labels { return s.labels }
// TODO(bwplotka): Can we provide any chunkenc buffer?
func (s *chunkToSeriesDecoder) Iterator() chunkenc.Iterator { return s.Chunk.Iterator(nil) }
type seriesSetToChunkSet struct {
SeriesSet
}
// NewSeriesSetToChunkSet converts SeriesSet to ChunkSeriesSet by encoding chunks from samples.
func NewSeriesSetToChunkSet(chk SeriesSet) ChunkSeriesSet {
return &seriesSetToChunkSet{SeriesSet: chk}
}
func (c *seriesSetToChunkSet) Next() bool {
if c.Err() != nil || !c.SeriesSet.Next() {
return false
}
return true
}
func (c *seriesSetToChunkSet) At() ChunkSeries {
return &seriesToChunkEncoder{
Series: c.SeriesSet.At(),
}
}
func (c *seriesSetToChunkSet) Err() error {
return c.SeriesSet.Err()
}
type seriesToChunkEncoder struct {
Series
}
// TODO(bwplotka): Currently encoder will just naively build one chunk, without limit. Split it: https://github.com/prometheus/tsdb/issues/670
func (s *seriesToChunkEncoder) Iterator() chunks.Iterator {
chk := chunkenc.NewXORChunk()
app, err := chk.Appender()
if err != nil {
return errChunksIterator{err: err}
}
mint := int64(math.MaxInt64)
maxt := int64(math.MinInt64)
seriesIter := s.Series.Iterator()
for seriesIter.Next() {
t, v := seriesIter.At()
app.Append(t, v)
maxt = t
if mint == math.MaxInt64 {
mint = t
}
}
if err := seriesIter.Err(); err != nil {
return errChunksIterator{err: err}
}
return NewListChunkSeriesIterator(chunks.Meta{
MinTime: mint,
MaxTime: maxt,
Chunk: chk,
})
}
type errChunksIterator struct {
err error
}
func (e errChunksIterator) At() chunks.Meta { return chunks.Meta{} }
func (e errChunksIterator) Next() bool { return false }
func (e errChunksIterator) Err() error { return e.err }