mirror of https://github.com/hpcaitech/ColossalAI
147 lines
5.7 KiB
Python
147 lines
5.7 KiB
Python
import os, sys
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import numpy as np
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import scann
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import argparse
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import glob
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from multiprocessing import cpu_count
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from tqdm import tqdm
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from ldm.util import parallel_data_prefetch
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def search_bruteforce(searcher):
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return searcher.score_brute_force().build()
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def search_partioned_ah(searcher, dims_per_block, aiq_threshold, reorder_k,
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partioning_trainsize, num_leaves, num_leaves_to_search):
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return searcher.tree(num_leaves=num_leaves,
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num_leaves_to_search=num_leaves_to_search,
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training_sample_size=partioning_trainsize). \
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score_ah(dims_per_block, anisotropic_quantization_threshold=aiq_threshold).reorder(reorder_k).build()
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def search_ah(searcher, dims_per_block, aiq_threshold, reorder_k):
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return searcher.score_ah(dims_per_block, anisotropic_quantization_threshold=aiq_threshold).reorder(
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reorder_k).build()
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def load_datapool(dpath):
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def load_single_file(saved_embeddings):
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compressed = np.load(saved_embeddings)
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database = {key: compressed[key] for key in compressed.files}
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return database
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def load_multi_files(data_archive):
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database = {key: [] for key in data_archive[0].files}
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for d in tqdm(data_archive, desc=f'Loading datapool from {len(data_archive)} individual files.'):
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for key in d.files:
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database[key].append(d[key])
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return database
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print(f'Load saved patch embedding from "{dpath}"')
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file_content = glob.glob(os.path.join(dpath, '*.npz'))
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if len(file_content) == 1:
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data_pool = load_single_file(file_content[0])
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elif len(file_content) > 1:
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data = [np.load(f) for f in file_content]
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prefetched_data = parallel_data_prefetch(load_multi_files, data,
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n_proc=min(len(data), cpu_count()), target_data_type='dict')
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data_pool = {key: np.concatenate([od[key] for od in prefetched_data], axis=1)[0] for key in prefetched_data[0].keys()}
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else:
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raise ValueError(f'No npz-files in specified path "{dpath}" is this directory existing?')
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print(f'Finished loading of retrieval database of length {data_pool["embedding"].shape[0]}.')
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return data_pool
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def train_searcher(opt,
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metric='dot_product',
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partioning_trainsize=None,
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reorder_k=None,
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# todo tune
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aiq_thld=0.2,
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dims_per_block=2,
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num_leaves=None,
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num_leaves_to_search=None,):
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data_pool = load_datapool(opt.database)
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k = opt.knn
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if not reorder_k:
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reorder_k = 2 * k
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# normalize
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# embeddings =
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searcher = scann.scann_ops_pybind.builder(data_pool['embedding'] / np.linalg.norm(data_pool['embedding'], axis=1)[:, np.newaxis], k, metric)
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pool_size = data_pool['embedding'].shape[0]
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print(*(['#'] * 100))
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print('Initializing scaNN searcher with the following values:')
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print(f'k: {k}')
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print(f'metric: {metric}')
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print(f'reorder_k: {reorder_k}')
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print(f'anisotropic_quantization_threshold: {aiq_thld}')
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print(f'dims_per_block: {dims_per_block}')
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print(*(['#'] * 100))
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print('Start training searcher....')
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print(f'N samples in pool is {pool_size}')
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# this reflects the recommended design choices proposed at
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# https://github.com/google-research/google-research/blob/aca5f2e44e301af172590bb8e65711f0c9ee0cfd/scann/docs/algorithms.md
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if pool_size < 2e4:
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print('Using brute force search.')
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searcher = search_bruteforce(searcher)
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elif 2e4 <= pool_size and pool_size < 1e5:
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print('Using asymmetric hashing search and reordering.')
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searcher = search_ah(searcher, dims_per_block, aiq_thld, reorder_k)
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else:
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print('Using using partioning, asymmetric hashing search and reordering.')
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if not partioning_trainsize:
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partioning_trainsize = data_pool['embedding'].shape[0] // 10
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if not num_leaves:
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num_leaves = int(np.sqrt(pool_size))
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if not num_leaves_to_search:
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num_leaves_to_search = max(num_leaves // 20, 1)
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print('Partitioning params:')
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print(f'num_leaves: {num_leaves}')
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print(f'num_leaves_to_search: {num_leaves_to_search}')
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# self.searcher = self.search_ah(searcher, dims_per_block, aiq_thld, reorder_k)
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searcher = search_partioned_ah(searcher, dims_per_block, aiq_thld, reorder_k,
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partioning_trainsize, num_leaves, num_leaves_to_search)
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print('Finish training searcher')
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searcher_savedir = opt.target_path
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os.makedirs(searcher_savedir, exist_ok=True)
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searcher.serialize(searcher_savedir)
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print(f'Saved trained searcher under "{searcher_savedir}"')
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if __name__ == '__main__':
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sys.path.append(os.getcwd())
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parser = argparse.ArgumentParser()
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parser.add_argument('--database',
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'-d',
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default='data/rdm/retrieval_databases/openimages',
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type=str,
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help='path to folder containing the clip feature of the database')
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parser.add_argument('--target_path',
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'-t',
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default='data/rdm/searchers/openimages',
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type=str,
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help='path to the target folder where the searcher shall be stored.')
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parser.add_argument('--knn',
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'-k',
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default=20,
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type=int,
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help='number of nearest neighbors, for which the searcher shall be optimized')
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opt, _ = parser.parse_known_args()
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train_searcher(opt,) |