Commit Graph

19 Commits (7a58dc5ad244f68d162e34a269a4a7c96f9896ab)

Author SHA1 Message Date
Boyuan Yao 7a58dc5ad2
Update metainfo patch branch (#2517)
* init

* rename and remove useless func

* basic chunk

* add evoformer

* align evoformer

* add meta

* basic chunk

* basic memory

* finish basic inference memory estimation

* finish memory estimation

* fix bug

* finish memory estimation

* add part of index tracer

* finish basic index tracer

* add doc string

* add doc str

* polish code

* polish code

* update active log

* polish code

* add possible region search

* finish region search loop

* finish chunk define

* support new op

* rename index tracer

* finishi codegen on msa

* redesign index tracer, add source and change compute

* pass outproduct mean

* code format

* code format

* work with outerproductmean and msa

* code style

* code style

* code style

* code style

* change threshold

* support check_index_duplicate

* support index dupilictae and update loop

* support output

* update memory estimate

* optimise search

* fix layernorm

* move flow tracer

* refactor flow tracer

* format code

* refactor flow search

* code style

* adapt codegen to prepose node

* code style

* remove abandoned function

* remove flow tracer

* code style

* code style

* reorder nodes

* finish node reorder

* update run

* code style

* add chunk select class

* add chunk select

* code style

* add chunksize in emit, fix bug in reassgin shape

* code style

* turn off print mem

* add evoformer openfold init

* init openfold

* add benchmark

* add print

* code style

* code style

* init openfold

* update openfold

* align openfold

* use max_mem to control stratge

* update source add

* add reorder in mem estimator

* improve reorder efficeincy

* support ones_like, add prompt if fit mode search fail

* fix a bug in ones like, dont gen chunk if dim size is 1

* fix bug again

* update min memory stratege, reduce mem usage by 30%

* last version of benchmark

* refactor structure

* restruct dir

* update test

* rename

* take apart chunk code gen

* close mem and code print

* code format

* rename ambiguous variable

* seperate flow tracer

* seperate input node dim search

* seperate prepose_nodes

* seperate non chunk input

* seperate reorder

* rename

* ad reorder graph

* seperate trace flow

* code style

* code style

* fix typo

* set benchmark

* rename test

* update codegen test

* Fix state_dict key missing issue of the ZeroDDP (#2363)

* Fix state_dict output for ZeroDDP duplicated parameters

* Rewrite state_dict based on get_static_torch_model

* Modify get_static_torch_model to be compatible with the lower version (ZeroDDP)

* update codegen test

* update codegen test

* add chunk search test

* code style

* add available

* [hotfix] fix gpt gemini example (#2404)

* [hotfix] fix gpt gemini example

* [example] add new assertions

* remove autochunk_available

* [workflow] added nightly release to pypi (#2403)

* add comments

* code style

* add doc for search chunk

* [doc] updated readme regarding pypi installation (#2406)

* add doc for search

* [doc] updated kernel-related optimisers' docstring (#2385)

* [doc] updated kernel-related optimisers' docstring

* polish doc

* rename trace_index to trace_indice

* rename function from index to indice

* rename

* rename in doc

* [polish] polish code for get_static_torch_model (#2405)

* [gemini] polish code

* [testing] remove code

* [gemini] make more robust

* rename

* rename

* remove useless function

* [worfklow] added coverage test (#2399)

* [worfklow] added coverage test

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* add doc for trace indice

* [docker] updated Dockerfile and release workflow (#2410)

* add doc

* update doc

* add available

* change imports

* add test in import

* [workflow] refactored the example check workflow (#2411)

* [workflow] refactored the example check workflow

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* Update parallel_context.py (#2408)

* [hotfix] add DISTPAN argument for benchmark (#2412)

* change the benchmark config file

* change config

* revert config file

* rename distpan to distplan

* [workflow] added precommit check for code consistency (#2401)

* [workflow] added precommit check for code consistency

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* adapt new fx

* [workflow] added translation for non-english comments (#2414)

* [setup] refactored setup.py for dependency graph (#2413)

* change import

* update doc

* [workflow] auto comment if precommit check fails (#2417)

* [hotfix] add norm clearing for the overflow step (#2416)

* [examples] adding tflops to PaLM (#2365)

* [workflow]auto comment with test coverage report (#2419)

* [workflow]auto comment with test coverage report

* polish code

* polish yaml

* [doc] added documentation for CI/CD (#2420)

* [doc] added documentation for CI/CD

* polish markdown

* polish markdown

* polish markdown

* [example] removed duplicated stable diffusion example (#2424)

* [zero] add inference mode and its unit test (#2418)

* [workflow] report test coverage even if below threshold (#2431)

* [example] improved the clarity yof the example readme (#2427)

* [example] improved the clarity yof the example readme

* polish workflow

* polish workflow

* polish workflow

* polish workflow

* polish workflow

* polish workflow

* [ddp] add is_ddp_ignored (#2434)

[ddp] rename to is_ddp_ignored

* [workflow] make test coverage report collapsable (#2436)

* [autoparallel] add shard option (#2423)

* [fx] allow native ckpt trace and codegen. (#2438)

* [cli] provided more details if colossalai run fail (#2442)

* [autoparallel] integrate device mesh initialization into autoparallelize (#2393)

* [autoparallel] integrate device mesh initialization into autoparallelize

* add megatron solution

* update gpt autoparallel examples with latest api

* adapt beta value to fit the current computation cost

* [zero] fix state_dict and load_state_dict for ddp ignored parameters (#2443)

* [ddp] add is_ddp_ignored

[ddp] rename to is_ddp_ignored

* [zero] fix state_dict and load_state_dict

* fix bugs

* [zero] update unit test for ZeroDDP

* [example] updated the hybrid parallel tutorial (#2444)

* [example] updated the hybrid parallel tutorial

* polish code

* [zero] add warning for ignored parameters (#2446)

* [example] updated large-batch optimizer tutorial (#2448)

* [example] updated large-batch optimizer tutorial

* polish code

* polish code

* [example] fixed seed error in train_dreambooth_colossalai.py (#2445)

* [workflow] fixed the on-merge condition check (#2452)

* [workflow] automated the compatiblity test (#2453)

* [workflow] automated the compatiblity test

* polish code

* [autoparallel] update binary elementwise handler (#2451)

* [autoparallel] update binary elementwise handler

* polish

* [workflow] automated bdist wheel build (#2459)

* [workflow] automated bdist wheel build

* polish workflow

* polish readme

* polish readme

* Fix False warning in initialize.py (#2456)

* Update initialize.py

* pre-commit run check

* [examples] update autoparallel tutorial demo (#2449)

* [examples] update autoparallel tutorial demo

* add test_ci.sh

* polish

* add conda yaml

* [cli] fixed hostname mismatch error (#2465)

* [example] integrate autoparallel demo with CI (#2466)

* [example] integrate autoparallel demo with CI

* polish code

* polish code

* polish code

* polish code

* [zero] low level optim supports ProcessGroup (#2464)

* [example] update vit ci script (#2469)

* [example] update vit ci script

* [example] update requirements

* [example] update requirements

* [example] integrate seq-parallel tutorial with CI (#2463)

* [zero] polish low level optimizer (#2473)

* polish pp middleware (#2476)

Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>

* [example] update gpt gemini example ci test (#2477)

* [zero] add unit test for low-level zero init (#2474)

* [workflow] fixed the skip condition of  example weekly check workflow (#2481)

* [example] stable diffusion add roadmap

* add dummy test_ci.sh

* [example] stable diffusion add roadmap (#2482)

* [CI] add test_ci.sh for palm, opt and gpt (#2475)

* polish code

* [example] titans for gpt

* polish readme

* remove license

* polish code

* update readme

* [example] titans for gpt (#2484)

* [autoparallel] support origin activation ckpt on autoprallel system (#2468)

* [autochunk] support evoformer tracer (#2485)

support full evoformer tracer, which is a main module of alphafold. previously we just support a simplifed version of it.
1. support some evoformer's op in fx
2. support evoformer test
3. add repos for test code

* [example] fix requirements (#2488)

* [zero] add unit testings for hybrid parallelism  (#2486)

* [hotfix] gpt example titans bug #2493

* polish code and fix dataloader bugs

* [hotfix] gpt example titans bug #2493 (#2494)

* [fx] allow control of ckpt_codegen init (#2498)

* [fx] allow control of ckpt_codegen init

Currently in ColoGraphModule, ActivationCheckpointCodeGen will be set automatically in __init__. But other codegen can't be set if so. 
So I add an arg to control whether to set ActivationCheckpointCodeGen in __init__.

* code style

* [example] dreambooth example

* add test_ci.sh to dreambooth

* [autochunk] support autochunk on evoformer (#2497)

* Revert "Update parallel_context.py (#2408)"

This reverts commit 7d5640b9db.

* add avg partition (#2483)

Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>

* [auto-chunk] support extramsa (#3) (#2504)

* [utils] lazy init. (#2148)

* [utils] lazy init.

* [utils] remove description.

* [utils] complete.

* [utils] finalize.

* [utils] fix names.

* [autochunk] support parsing blocks (#2506)

* [zero] add strict ddp mode (#2508)

* [zero] add strict ddp mode

* [polish] add comments for strict ddp mode

* [zero] fix test error

* [doc] update opt and tutorial links (#2509)

* [workflow] fixed changed file detection (#2515)

Co-authored-by: oahzxl <xuanlei.zhao@gmail.com>
Co-authored-by: eric8607242 <e0928021388@gmail.com>
Co-authored-by: HELSON <c2h214748@gmail.com>
Co-authored-by: Frank Lee <somerlee.9@gmail.com>
Co-authored-by: Haofan Wang <haofanwang.ai@gmail.com>
Co-authored-by: Jiarui Fang <fangjiarui123@gmail.com>
Co-authored-by: ZijianYY <119492445+ZijianYY@users.noreply.github.com>
Co-authored-by: YuliangLiu0306 <72588413+YuliangLiu0306@users.noreply.github.com>
Co-authored-by: Super Daniel <78588128+super-dainiu@users.noreply.github.com>
Co-authored-by: ver217 <lhx0217@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang97@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
Co-authored-by: oahzxl <43881818+oahzxl@users.noreply.github.com>
Co-authored-by: binmakeswell <binmakeswell@gmail.com>
Co-authored-by: Fazzie-Maqianli <55798671+Fazziekey@users.noreply.github.com>
Co-authored-by: アマデウス <kurisusnowdeng@users.noreply.github.com>
2023-01-27 09:52:21 +08:00
Boyuan Yao d5c5bc219e
[SC] add GPT example for auto checkpoint (#1889)
* [sc] SC tutorial for auto checkpoint

* [sc] polish examples

* [sc] polish readme

* [sc] polish readme and help information

* [sc] polish readme and help information
2022-11-11 23:17:25 +08:00
Super Daniel 448248b27c
[fx] metainfo_trace as an API. (#1873)
* [fx] metainfo_trace as an API.

* [fx] add return.
2022-11-10 20:58:37 +08:00
Super Daniel 0584654c79
[fx] refactor memory utils and extend shard utils. (#1754)
* [fx] change memory.py to memory_utils.py.

* [fx] add shard utils.

* [fx] fix import.

* [fx] check code style.

* [fx] add comment.

* [autoparallel] first move.

* [fx] add time computations.
2022-10-26 14:24:41 +08:00
Super Daniel 393f594051
[fx/meta/rpc] move _meta_registration.py to fx folder / register fx functions with compatibility checks / remove color debug (#1710)
* [fx] move meta registration

* [fx] fix tests.

* [fx] fix test.

* [fx] fix.

* [meta] refactor meta registration.py.

* [fx] add compatibility descriptions.

* [fx] polish import.

* [fx] add a decorator.

* [fx] fix tests.

* [fx] remove print.

* [fx] edit raise error.

* [fx] edit raise error.

* [fx] add type hint.

* [fx] fix import in experimental.

* [rpc] remove color debug.

* [meta] fix naming.
2022-10-18 10:44:23 +08:00
Super Daniel 3dd6994427
[fx/profiler] assigned UUID to each unrecorded tensor/ improved performance on GPT-2 (#1679)
* [fx/profiler] modify data_ptr into uuid for all tensors.

* [fx] modify uuid.

* [fx/profiler] tune performance on GPT-2.

* [fx] updates.

* [fx] debug.

* [fx] debug.

* [fx] cuda.
2022-10-11 11:03:35 +08:00
Super Daniel 04bbabeea8
[fx/profiler] provide a table of summary. (#1634)
* [fx/profiling] provide summary for MetaInfoProp.

* [fx/profiler] provide a table of summary.

* [fx] optimize table repr.
2022-09-23 18:12:43 +08:00
Super Daniel d967779a32
[fx/profiler] tuned the calculation of memory estimation (#1619)
* [fx] tuned the meta info and rotor solver.

* [fx] remove import.

* [fx] remove import.

* [fx] remove import.

* [fx] tune the meta calculations.

* [fx] polish comments.

* [fx] remove assertions.

* [fx] modify test cases.

* [fx] modify test cases.

* [fx] optimize import.

* [fx
2022-09-23 10:59:47 +08:00
Super Daniel c8e9b2ad78
[hotfix/rotor] fix variable names (#1597)
* [fx] add some comment and docstrings.

* [fx] add dataflow analysis for an autograd graph.

* add intepretation for graph analysis.

* [fx] before doing save_tensor_hooks.

* [fx] provide an accurate estimation of memory except for GPT-2.

* [fx] provide an accurate estimation of memory except for GPT-2.

* [fx] provide an accurate estimation of memory except for GPT-2.

* [fx] a very accurate version on GPT-2.

* [fx] refactor code.

* [fx] remove redundant inplace=True.

* [fx] refactor code.

* [fx] refactor code.

* [fx] refactor code.

* [fx] dive into backward memory.

* [fx] fix variable names in ckpt_solvers and unskip tests.

* [fx] commit my changes.

* [fx] restore skips.

* [fx] restore skips.

* [fx] chaange stage into phase.

* [fx] chaange stage into phase.

* [fx] chaange stage into phase.
2022-09-14 14:27:04 +08:00
Super Daniel 5c494d4540
[fx] provide an accurate estimation of memory. (#1587)
* [fx] add some comment and docstrings.

* [fx] add dataflow analysis for an autograd graph.

* add intepretation for graph analysis.

* [fx] before doing save_tensor_hooks.

* [fx] provide an accurate estimation of memory except for GPT-2.

* [fx] provide an accurate estimation of memory except for GPT-2.

* [fx] provide an accurate estimation of memory except for GPT-2.

* [fx] a very accurate version on GPT-2.

* [fx] refactor code.

* [fx] remove redundant inplace=True.

* [fx] refactor code.

* [fx] refactor code.

* [fx] refactor code.

* [fx] dive into backward memory.
2022-09-14 09:36:43 +08:00
Super Daniel 4f59693207
[fx] provide a stable but not accurate enough version of profiler. (#1547)
* [fx] compute memory stat and flop count for MetaInfoProp.

* [fx] modify node attribute.

* [fx] modify ckpt_chen.

* [fx] fix compatibility.

* [fx] fix import error.

* [fx] skip test for MetaInfoProp.

* [fx] skip test for MetaInfoProp.

* [fx] skip test for MetaInfoProp.

* [fx] skip test for MetaInfoProp.

* [fx] skip if torch 1.11.0.

* [fx] recover MetaInfoProp support for PyTorch 1.11.

* [fx] provide a stable but not accurate enough version of profiler.

* [fx] provide a stable but not accurate enough version of profiler.

* [fx] fix compatibility in tests.

* [fx] fix compatibility in tests.

* [fx] fix compatibility in tests.

* [fx] fix compatibility in tests.

* [fx] fix compatibility in tests.

* [fx] fix compatibility in tests.

* [fx] fix compatibility in tests.

* [fx] fix compatibility in tests.

* [fx] fix compatibility in tests.

* [fx] fix compatibility in tests.

* [fx] fix import error.
2022-09-07 11:21:04 +08:00
Super Daniel 5cc849f6ce
[fx] hack __torch_dispatch__ for meta tensor and autograd. (#1515)
* [fx] hack __torch_dispatch__ for meta tensor and autograd.

* [fx] hack __torch_dispatch__ for meta tensor and autograd.

* [fx] hack __torch_dispatch__ for meta tensor and autograd.

* [fx] hack __torch_dispatch__ for meta tensor and autograd.

* [fx] hack __torch_dispatch__ for meta tensor and autograd.

* [fx] add bad case detections.

* [fx] add bad case detections.

* [fx] rename MetaTensor attributes.

* [fx] fix unexpected error.

* [fx] fix unexpected error.

* [fx] fix unexpected error.

* [fx] fix unexpected error.

* [fx] fix unexpected error.

* [fx] add register backward for native_batch_norm_backward.

* [fx] add more meta backend support for nn.Modules.

* [fx] add meta backend to support timm and torchvision models.

* [fx] add meta hardswish for timm models.
2022-08-31 16:30:16 +08:00
Super Daniel 32efe8e740
[fx] add profiler for fx nodes. (#1480)
* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] merge development into main (#1)

* [fx] activation checkpointing using Chen strategies.

* [fx] add test for ckpt_solver_chen

* [fx] add vanilla activation checkpoint search with test on resnet and densenet

* [fx] add a namespace code for solver_chen.

* [fx] fix the false interpretation of algorithm 3 in https://arxiv.org/abs/1604.06174.

* [fx] fix lowercase naming conventions.

* [fx] simplify test for ckpt.

* [fx] add rules to linearize computation graphs for searching. (#2)

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] merge development into main (#1)

* [fx] activation checkpointing using Chen strategies.

* [fx] add test for ckpt_solver_chen

* [fx] add vanilla activation checkpoint search with test on resnet and densenet

* [fx] add a namespace code for solver_chen.

* [fx] fix the false interpretation of algorithm 3 in https://arxiv.org/abs/1604.06174.

* [fx] fix lowercase naming conventions.

* [fx] simplify test for ckpt.

* [fx] fix test and algorithm bugs in activation checkpointing.

* [fx] polish ckpt_test.

* [fx] add rules to linearize computation graphs for searching.

* [fx] remove chen_sqrt for sake of simplicity

* [fx] remove chen_sqrt for sake of simplicity

* [fx] remove chen_sqrt for sake of simplicity

* [fx] remove chen_sqrt for sake of simplicity

* [fx] fix inconsistencies.

* [fx] fix MetaInfoProp.

* [fx] fix MetaInfoProp.

* [fx] consider MetaInfoProp for inplace operands.

* [fx] consider MetaInfoProp for inplace operands.

* [fx] consider MetaInfoProp for inplace operands.

* [fx] consider MetaInfoProp for inplace operands.

* [fx] consider MetaInfoProp for inplace operands.

* [fx] add profiler for fx nodes.

* [fx] add profiler for fx nodes.

* [fx] add profiler for fx nodes.

* [fx] add profiler for fx nodes.

* [fx] add profiler for fx nodes.

* [fx] add profiler for fx nodes.

* [fx] add profiler for fx nodes.

* [fx] fix error in tests.

* [fx] unfix bug.

* [fx] unfix bug.
2022-08-24 16:22:44 +08:00
Super Daniel bbc58d881b
[fx] fix MetaInfoProp for incorrect calculations and add detections for inplace op. (#1466)
* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] merge development into main (#1)

* [fx] activation checkpointing using Chen strategies.

* [fx] add test for ckpt_solver_chen

* [fx] add vanilla activation checkpoint search with test on resnet and densenet

* [fx] add a namespace code for solver_chen.

* [fx] fix the false interpretation of algorithm 3 in https://arxiv.org/abs/1604.06174.

* [fx] fix lowercase naming conventions.

* [fx] simplify test for ckpt.

* [fx] add rules to linearize computation graphs for searching. (#2)

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] merge development into main (#1)

* [fx] activation checkpointing using Chen strategies.

* [fx] add test for ckpt_solver_chen

* [fx] add vanilla activation checkpoint search with test on resnet and densenet

* [fx] add a namespace code for solver_chen.

* [fx] fix the false interpretation of algorithm 3 in https://arxiv.org/abs/1604.06174.

* [fx] fix lowercase naming conventions.

* [fx] simplify test for ckpt.

* [fx] fix test and algorithm bugs in activation checkpointing.

* [fx] polish ckpt_test.

* [fx] add rules to linearize computation graphs for searching.

* [fx] remove chen_sqrt for sake of simplicity

* [fx] remove chen_sqrt for sake of simplicity

* [fx] remove chen_sqrt for sake of simplicity

* [fx] remove chen_sqrt for sake of simplicity

* [fx] fix inconsistencies.

* [fx] fix MetaInfoProp.

* [fx] fix MetaInfoProp.

* [fx] consider MetaInfoProp for inplace operands.

* [fx] consider MetaInfoProp for inplace operands.

* [fx] consider MetaInfoProp for inplace operands.

* [fx] consider MetaInfoProp for inplace operands.

* [fx] consider MetaInfoProp for inplace operands.
2022-08-18 11:27:06 +08:00
Super Daniel f20cb4e893
[fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages (#1425)
* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages

* [fx] modify the calculation of node_size in MetaInfoProp for activation checkpointing usages
2022-08-10 16:36:35 +08:00
YuliangLiu0306 5542816690
[fx]add gpt2 passes for pipeline performance test (#1366)
* [CLI] add CLI launcher

* Revert "[CLI] add CLI launcher"

This reverts commit df7e6506d4.

* [fx]add gpt2 passes for pipeline performance test
2022-07-26 14:31:00 +08:00
YuliangLiu0306 051592c64e
[fx] update MetaInforProp pass to process more complex node.meta (#1344)
* [CLI] add CLI launcher

* Revert "[CLI] add CLI launcher"

This reverts commit df7e6506d4.

* [fx] update MetaInforProp pass to process more complex node.meta
2022-07-21 10:57:52 +08:00
YuliangLiu0306 e8acf55e8b
[fx] add balanced policy v2 (#1251)
* [CLI] add CLI launcher

* Revert "[CLI] add CLI launcher"

This reverts commit df7e6506d4.

* [fx] add balanced policy v2

* add unittest
2022-07-15 14:54:26 +08:00
YuliangLiu0306 2b7dca44b5
[fx]get communication size between partitions (#1224)
* [CLI] add CLI launcher

* Revert "[CLI] add CLI launcher"

This reverts commit df7e6506d4.

* [fx]get communication size between partitions.

* polish
2022-07-07 16:22:00 +08:00